Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1384 ATGGCTGCTCCCAGGATATTTTCTCTGCTCTCTGCTTCTTCCACTGCTGCTTCTTTACGTTCTTTTGGTCGGTATTCTAGATGGGGTAGAGGCAGTAGCCGGTTTAGCACAGCTGTTGCAACTGAGGAGGAACCGATAACTCCACCAGTTCAAATAGATTATACTCAGCTCCTCATCAATGGAAGATTCGTTGATGCGGCATCGGGGAAAACCTTTCCAACTTTGGATCCAAGAACAGGGGATGTGATTGCTCATGTTGCTGAAGGTGAGGCTGAAGATATAAACAGGGCAGTCTCTGCTGCTCGCAAAGCATTTGATGAGGGACCATGGCCAAAGATGACCCCTTATGAAAGATCATGCATACTTTTTCGCTTTGCTGATTTGCTTGAAAAGCACTGTAGTGAAATTGCAGCCCTTGAATCATGGGATAATGGAAAGCCTTATGAACAAGCTGCAAATGTTGAAATACCAATGGTGATTCGCGTATTTCGATATTATGCTGGCTGGGCAGATAAGATTCATGGTCTCACAGTTCCTGCTGATGGGCTGCACCATGTCCAAACCCTCCATGAACCCATTGGTGTTGCAGGGCAGATTATTCCTTGGAACTTTCCTCTATTATTGTATGGTTGGAAGGTTGGGCCCGCATTAGCATGTGGTAACACTATTGTATTAAAGACTGCAGAGCAGACACCATTATCTGCCCTCTATGCGTCCAAGCTGTTATATGAGGCTGGACTCCCTCCTGGTGTTTTAAATGTGGTTTCCGGATTTGGTCCTACAGCTGGGGCCGCTCTTTCTAGTCATATGGATGTGGACAAGCTTGCTTTCACAGGGTCAACTGGCACTGGTAAGATTGTACTTGGATTGGCTGCAAAGAGCAATCTTAAGCCAGTGACTTTAGAACTTGGAGGAAAATCTCCCTTCATTGTGTGTGAGGATGCTGATGTTGATAAGGCTGTTGAGCTTTCACACACTGCTCTGTTCTATAATCAGGGACAGTCTTGCTGTTCTGGGTCACGCACATTTGTACACGAAAGCATATATGATGAGTTTATAGAGAAAGCAAAGGCACGTGCTCTGAAACGTGTAGTTGGTGATCCTTTCAAGAAGGGGGTTGAACAAGGACCCCAGATTGATTCTCAGCAATTCAACAAGATCCTTGGTTACATAAAATCTGGTATTGAAGCTGGTGCAACTCTTGAAGCTGGAGGTGAAAAATTCAGCTCCAAAGGCTACTATATTCAACCCACTGTCTTCTCAAATGTCCATGATAATATGTTGATAGCAAAAGAAGAGATCTTTGGCCCAGTGCAGTCCATCTTGAAATTCAAGGATCTTGATGAGGTGATCCGAAGGGCAAACGCTACTCACTATGGGCTGGCTGCTGGAATTTTCACTCAGAATCTAGACACTGCCAATACTCTGACTCGAGCTTTGAGAGTTGGGACAGTATGGATTAACTGCTTTTTTGTCTTTGATGCTGCAATTCCTTTTGGTGGGAGGAAGATGAGTGGGCATGGCAGAGAAAAGGGAATTTATGGCCTTAGTAACTACATGCAAGTTAAGGCTGTTGTTACGCCTTTGAAAAACCCGGCTTGGTTATAA 1608 44.71 MAAPRIFSLLSASSTAASLRSFGRYSRWGRGSSRFSTAVATEEEPITPPVQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGPWPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGWADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAEQTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLGLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIYDEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFSSKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFKDLDEVIRRANATHYGLAAGIFTQNLDTANTLTRALRVGTVWINCFFVFDAAIPFGGRKMSGHGREKGIYGLSNYMQVKAVVTPLKNPAWL* 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27924806 27929085 - Vvi14g1384 Vvi14g1384 776451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1384 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Vvi14g1384 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 21 535 - -
Vvi14g1384 535 SUPERFAMILY ALDH-like 52 529 IPR016161 GO:0016491
Vvi14g1384 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Vvi14g1384 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491
Vvi14g1384 535 CDD ALDH_F2BC 52 527 - -
Vvi14g1384 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491
Vvi14g1384 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 21 535 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1384 Vvi17g722 ECH
Vvi1g738 Vvi14g1384 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1384 K00128 - vvi:100259296 1055.43