Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1386 ATGAATACAGCAATTCTCACGCCGGCCTCCAAGTTCCGCCCCTTCCGGCGACGACCCTCCTACGCGCCCATCACCTCCGACCTCAACCCCTACCACATTCTCTGGCGCTACCAAATTCTCGAGCCCGACGGCGACATCGTCACTTATTGGAACCACGTCTTCCTCGTCACCTCTCTCATTTCCCTTTTCCTCGACCCTCTCTACTTCTTCCTCCCCTCCGTCGGCGGTCCTGCCTGCCTCACCAGTGACACCAGCCTCGGCATTGTTGTTACCTTCTTCCGTACTGTTTCCGATCTCTTTTACTTGCTGCATATGGTGATGAAGTTTCGGACTGCTTTCGTGGCTCCCAGTTCGAGAGGCCTTGGTCGCGGTGAGCTGGTTATGGATGCTCACACGATCGCTATGCGTTACTTGAAGTCTGATTTTATTATTGATTTAGCTGCCACTCTACCGCTTCCTCAGGCACGTCTTTGGGTTAGGGTTCAGCTGACTACTTTAATCTTTCTTAAAAGTTTTCCAGAAAAGGAAAAGGGAATAGATATTGTCATCTGGTTGGTAATACCTGCAACAAAAAAAGACAGAGCAGATCAGACCAACAACACTCTTGCTCTCATTGTACTCATTCAATATGTTCCTAGACTGTTCCTTATTTTCCCTTTGAATCGGCGGATCATAAAAACTACAGGAGTTGTTGCTAAGACTGCTTGGGCAGGAGCTGCTTACAATCTCCTTCTTTACATGCTAGCCAGTCATGTATTAGGAGCTTCTTGGTATCTATTGTCCATGGGCCGACAGCACGCCTGCTGGAAAGCAGAGTGTGCAAAAGAAAGTGCAGCAGGAATTTCATTTTGTCTCCCTAGTTTTCTGGACTGTAAAAGTTTGGAACTAGAAGAACGGCAGTATTGGATGAATGCTACTCGAGTAGTTGCTAATTGTGATGCTAGAGGGCATGATACAGAATTTAAGTTTGGAATGTTTGCAGATGCTTTTACTAATGATGTTGCTTCATCAAAATTTATTGAGAAATACTTGTATTGCCTCTGGTGGGGATTAAAAAATTTAAGTTCATATGGACAGACTTTGGAAACAAGCATTTATATTGGCGAGACAACATTTTGCATTGTTATATGCATTGGGGGTTTAGTTCTATTTTCACAGTTGATTGGAAACATGCAGACCTATTTGCAATCTATGACGGTAAGACTTGAAGAATGGAGGGTTAAGCGAAGAGATACAGAGGAGTGGATGAGGCACCGTCAATTGCCTCCAGCTTTGCAAGAACGGGTACATCGGTTTGTGCAGTACAAATGGCTTGCAACAAGAGGAGTTCATGAAGAATCAATTTTGCATTGGTTGCCCCTGGATCTCCGTCGTGAAATACAAAGGCACCTATGTCTTGGCCTTGTCCGCCGTGTGCCTTTCTTTGCACAAATGGATGACCAGCTTCTTGATGCCATTTGCGAACGCCTCACCTCATCCTTGAGTACTGAAGGCACCTATATCTTTCGAGAGGGTGATCCAGTAAATGAGATGCTGTTTATCATTAGAGGACAACTGGAGAGCTCCACAACCAATGGGGGAAGATCAGGATTCTTCAACTCCATCACCCTTAGACCTGGTGACTTCTGTGGCGAGGAATTACTGACATGGGCCTTAATGCCTAACCCGAGCATAAACTTGCCGTCTTCTACTCGAACTGTAAGGTCTCTTTGTGAAGTTGAAGCTTTTGCACTAACAGCTGAAGACCTCAAATTTGTTGCAAGTCAGTTCAGGCGACTTCACAACAAGAAACTCCAGCATGCCTTCAGGTACTATTCTCAACAATGGAGGACATGGGGTACTTGCTATTTACAAGATGCTTGGAGAAGATATAAAAAGAGAAAGCTGGCAAAGGAGTTGGCTAGACAAGAGAGCTACAACTATATGCTGATCCCTGATCAAGAAAGAGGGGTTGCTCAGGAGGTTCGGGTGGTAGAGCCTGCTGCTCCTAGCTTGAAGATGCCCCGGCTGCTAAAGCCAGATGAACCTGATTTTTCTGTAGGCCATGAGGATGTTTAG 2058 45.68 MNTAILTPASKFRPFRRRPSYAPITSDLNPYHILWRYQILEPDGDIVTYWNHVFLVTSLISLFLDPLYFFLPSVGGPACLTSDTSLGIVVTFFRTVSDLFYLLHMVMKFRTAFVAPSSRGLGRGELVMDAHTIAMRYLKSDFIIDLAATLPLPQARLWVRVQLTTLIFLKSFPEKEKGIDIVIWLVIPATKKDRADQTNNTLALIVLIQYVPRLFLIFPLNRRIIKTTGVVAKTAWAGAAYNLLLYMLASHVLGASWYLLSMGRQHACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATRVVANCDARGHDTEFKFGMFADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYIGETTFCIVICIGGLVLFSQLIGNMQTYLQSMTVRLEEWRVKRRDTEEWMRHRQLPPALQERVHRFVQYKWLATRGVHEESILHWLPLDLRREIQRHLCLGLVRRVPFFAQMDDQLLDAICERLTSSLSTEGTYIFREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNPSINLPSSTRTVRSLCEVEAFALTAEDLKFVASQFRRLHNKKLQHAFRYYSQQWRTWGTCYLQDAWRRYKKRKLAKELARQESYNYMLIPDQERGVAQEVRVVEPAAPSLKMPRLLKPDEPDFSVGHEDV* 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27931598 27936505 - Vvi14g1386 Vvi14g1386 776453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1386 685 Pfam Ion transport protein 48 401 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vvi14g1386 685 Pfam Cyclic nucleotide-binding domain 497 585 IPR000595 -
Vvi14g1386 685 CDD CAP_ED 474 605 IPR000595 -
Vvi14g1386 685 SUPERFAMILY Voltage-gated potassium channels 42 396 - -
Vvi14g1386 685 Gene3D Helix hairpin bin 397 465 - -
Vvi14g1386 685 SUPERFAMILY cAMP-binding domain-like 404 600 IPR018490 -
Vvi14g1386 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 32 641 - -
Vvi14g1386 685 SMART cnmp_10 474 605 IPR000595 -
Vvi14g1386 685 ProSiteProfiles cAMP/cGMP binding motif profile. 474 548 IPR000595 -
Vvi14g1386 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 32 641 - -
Vvi14g1386 685 Gene3D - 53 396 - -
Vvi14g1386 685 Gene3D Jelly Rolls 472 592 IPR014710 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1386 Vvi17g721 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1386 K05391 - vvi:100254180 1309.66