Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1392 ATGGTGGCTCTGGAGTGCACTAACGTGGGGCTGAACACGCTGTACAAGGCAGCCACCTTGAGGGGTTTGAACTACCATGTCTTTGTGGTCTATGCTTATGGTATTGCTGCGCTTGTTCTCCTTCCCTCACCCTTCATTACCCACAGGAGAGGAGTTCTTCCCCCACTGAGCTTCCCCGTTCTGTGTAAAATCTTTGTACTTGGATTAATTGGGTGTGCATCTCAGACAATGGGTTATAGAGGCATTAACATCAGTTCCCCAACTCTTGCTTCTGCCATCAGCAACCTCGTTCCAGCTTTTACTTTCATACTTGCAGTCATTTTCAGGATGGAAAAGCTAGCTTTGAGAAGCTCAAGCAGCCAGGCTAAAATCATTGGCACCATAGTATCAATATCAGGGGCATTTGTAGTGACTCTGTATAAGGGGCCCCCAATCATATTGACTCCATCTCCATCCATTTCACTTCATCAACCTCCTCACCCTCTGCGTTCATCAGAATCAAGCTGGATTATTGGTGCCCTTTTCCTTTCAGTCGAGTATTTCCTGACTCCAGTTTGGTACATTGTTCAGGCACACATCATAAAGGAGTACCCCTCAGAACCAACTGTGGTCTTTTTCTACAACTTATTCGTGTCCCTTCTGGCGGCCATTGTTGGTTTGGTCACAGAACCAAACTCAAGTGTTTGGATAGTAAGGCCAAGAATAGCATTGGCTTCTATAGTGTGCTCGGGCATTTTCGGGTCATTTTTAGGTAATACTATCCACACCTGGGCGATACGCATGAAGGGGCCAGTCTATGTAGCAATGTTCAAGCCATTAGCGATTATCATTGCAGTTACCATGGGTGTTGCGCTCCTCGGTGATTCTCTCTATCTTGGAAGTGTCATTGGCGCCACAATCATAACCATGGGGTTTTACACCGTGATGTGGGGGAAAGCACAGGAAGACATGGTTGAGGACTGTACAATCGGTAGCTTGGAATCACCATCTGCTCAAAAGGCTCCTCTATTGCAGAACTATAAAACGGAGGAAATTTAG 1038 46.24 MVALECTNVGLNTLYKAATLRGLNYHVFVVYAYGIAALVLLPSPFITHRRGVLPPLSFPVLCKIFVLGLIGCASQTMGYRGINISSPTLASAISNLVPAFTFILAVIFRMEKLALRSSSSQAKIIGTIVSISGAFVVTLYKGPPIILTPSPSISLHQPPHPLRSSESSWIIGALFLSVEYFLTPVWYIVQAHIIKEYPSEPTVVFFYNLFVSLLAAIVGLVTEPNSSVWIVRPRIALASIVCSGIFGSFLGNTIHTWAIRMKGPVYVAMFKPLAIIIAVTMGVALLGDSLYLGSVIGATIITMGFYTVMWGKAQEDMVEDCTIGSLESPSAQKAPLLQNYKTEEI* 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27995697 27998537 + Vvi14g1392 Vvi14g1392 776459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1392 345 PANTHER WAT1-RELATED PROTEIN 2 336 IPR030184 GO:0016021|GO:0022857
Vvi14g1392 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 313 - -
Vvi14g1392 345 PANTHER WAT1-RELATED PROTEIN 2 336 - -
Vvi14g1392 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 35 141 - -
Vvi14g1392 345 Pfam EamA-like transporter family 10 138 IPR000620 GO:0016020|GO:0016021
Vvi14g1392 345 Pfam EamA-like transporter family 172 309 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1392 Vvi17g707 ECH
Vvi1g760 Vvi14g1392 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1392 - - vvi:100259498 672.159