Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1398 ATGCCTTCTAAAATTTATTTTTTTAAATTGTTTTTAAGGAAAAATTTATATATTTTTTGGTGCGGAAATTTAGGTATATGTACAGAGGATGGCCCCCTATATTTTTGGTGTCTCCAAGTTGGACTGAAATCTCTGACCTCTCTCTCAGCTGTAGGGATCTCAATTTTTGGAGTCGGGGTTTTTGTTTTTGGCGCGGAATTCTGTGCTTTCGATTCAAACGCAATGTCACAAGGCTATGCAATAGAGCTTTACTTCGACCCAGCGCTGGAAAACCAAGTGTTGAAGGCTTGGAACGTGCTGGCTCGCCGCCAAATCAGTACCCAACTCATTGAGATTGAATCACGCCCTCATATCACCCTATTCTCCAGCCCCCTTATCGAGCCCGCAAGGCTCGAAAACATCATCAAATCTTTCGCCGGAAAGCAAGAGCCTTTGCCCTTATCCTTCTCCTCAATTGGAAGCCTTCCCAATGACAAGAACGTCCTCTTCCTTGCCCCTACTCCGACCTTATCACTCCTTCAATTCCATTCCCAATTGTGCGATGCTTTGAAGAAAGAGGGCATCGAAATTGGGGAGGAGTATCGCCCTGACTCGTGGATTCCTCATTGCCCAGTTGCTCAGGAAGTCCCCAAGATTCGAATGGGGGAGGCGTTCAGTGTATTGCGGGATTTGAAGTTGCCGGTTACTGGGTATGCAATGGACATCGGGTTGGTGGAGTTTTCGCCGGTTCGAGAACTCTTCTCCTTTGTGCTCAGTAACACACTAGAAGCGTGA 774 46.38 MPSKIYFFKLFLRKNLYIFWCGNLGICTEDGPLYFWCLQVGLKSLTSLSAVGISIFGVGVFVFGAEFCAFDSNAMSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPLIEPARLENIIKSFAGKQEPLPLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEYRPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSPVRELFSFVLSNTLEA* 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28039385 28040937 + Vvi14g1398 Vvi14g1398 776465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1398 257 PANTHER - 75 256 - -
Vvi14g1398 257 SUPERFAMILY LigT-like 78 207 IPR009097 -
Vvi14g1398 257 Gene3D Cyclic phosphodiesterase 79 251 - -
Vvi14g1398 257 Pfam 2'-5' RNA ligase superfamily 115 229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1398 - - vvi:100249281 364.385