Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1401 ATGGCTCCAAGCTCGGTTGTACTCACAATCGAAAAGCCTAGCAACTTCTCTCTAGTGGAGATCACAGGTTCAAAGACATCCATGTTTCCCGAGAAGGAAAAGGCTGCTAGTCCCAAGCAGTTTACATGGGTTCTTCTCTTGAAAGTTCACAGAGCTCTTGCTTGCCTTTCATGGCTGGCGACTGGTGCGTGGACTGTGTTTGTTGCAGCCAAGAAGCGTTTGGCATTATCTGAGATAAAGGAAGAAGAACCCACGAACAGGGGAAGGTTGTACAGATTCATCAGAGCTTTTGTCTTCATTTCAATAGTGGCTTTGTTCATGGAAGTCATTGCCCATTTCAAGAAATGGAATTTGAATCTGATTCAGCCATTGGAGGTCCAGGGCCTTGTGCAGTGGTCCTACATGGCTTGGCTGTCCTTCAGAGTTGATTACATTGCCCCTTTGGTTCTAATTCTTTCCAAATTCTGCATTGTCCTTTTCTTGATTCAATCTCTCGATCGGCTTTTTCTCTGTTTTGGCTGTTTCTGGATTAAGCACAAGAAGTTGAAGCCCGAGATGGATGCAGACGCCTATGACATTGAGGATGGCTCAAGTTTCCCAATGGTCCTTGTTCAGATTCCAATGTGCAATGAAAAAGAGGTATATGCACAATCAATCTCTGCAGTCTGTCAGCTGGATTGGCCGAGGGAGCGGCTCCTGATTCAAGTTCTCGATGACTCAGACGATGAAAATGTACAGCTACTAATAAAAAATGAAGTCTCTTCATGGAACCAGAAAGGGGTGAACATAATCTACAGACATCGATTTGTAAGAACCGGGTACAAAGCTGGCAATCTGAAATCAGCCATGGCCTGTGACTATGTTAAAGACTACGAGTTTGTTGCCATTTTCGACGCAGACTTCCAGCCCAATCCTGATTTCCTCAAGCAAACAATCCCTCACTTTAAGGGAAATCCTGAGGTGGGTCTTGTCCAGGCTCGGTGGTCTTTTGTGAACAAGGATGAGAATCTACTCACTAGGCTCCAGAACATCAATCTGTGCTTCCATTTCGAGGTGGAACAGCAAGTCAATGGCCTTTTCCTCGAATTCTTCGGGTTCAATGGGACTGCAGGTGTGTGGAGAATTAAGGCCTTAGAGGAGTCAGGAGGATGGCTGGAGAGAACAACAGTTGAGGATATGGACATTGCCGTCCGAGCCCACTTGCATGGGTGGAAGTTCATCTTCCTCAATGATGTCAAAGTGCCCTGTGAATTACCAGAGTCCTATCAAGCTTACAAGAAGCAGCAGCATCGCTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTCCCTGCTATCGTAACCTCCAAGATGGGGATATGGAAGAAGGCCAATTTGATATTCCTGTTCTTTCTTCTAAGGAAACTAATTCTTCCCTTCTACTCATTCACACTCTTCTGTATCATACTTCCATTAACCATGTTCATACCGGAGGCTGAATTGCCTGTTTGGGTGATCTGCTACATCCCCATTTTCATGTCCCTTTTGAACATTCTCCCAGCCCCAAAATCATTCCCATTCCTAGTCCCATACCTACTATTCGAAAACACAATGTCTGTCACAAAATTCAATGCCATGGTATCAGGGCTATTTCAGCTGGGAAGCGCCTACGAATGGGTGGTGACAAAGAAGACAGGCAGCAAAGTGAAGGAACAGAAGGCCCCTCATCTGAAGAAGAAGAAGAGAAACAGGCTCTACAGGAAGGAGCTGGCACTGGCTTTTCTTCTGCTTACTGCCTCTGCAAGAAGCCTACTGTCAGCACATGGGGTTCACTTCTACTTCTTGCTTTTCCAGGGACTGTCTTTTCTGGTGGTGGGATTGGACTTAATTGGGGAGCAGATGATTGATTGTAAAATCTTATATGTTATCATTGTTTGCAACAATGAGGACATCAGTAAAGAAAGCAACTTCAACACGATCTTAGAAATTAGATTTTTTTTAGAATAG 1989 44.85 MAPSSVVLTIEKPSNFSLVEITGSKTSMFPEKEKAASPKQFTWVLLLKVHRALACLSWLATGAWTVFVAAKKRLALSEIKEEEPTNRGRLYRFIRAFVFISIVALFMEVIAHFKKWNLNLIQPLEVQGLVQWSYMAWLSFRVDYIAPLVLILSKFCIVLFLIQSLDRLFLCFGCFWIKHKKLKPEMDADAYDIEDGSSFPMVLVQIPMCNEKEVYAQSISAVCQLDWPRERLLIQVLDDSDDENVQLLIKNEVSSWNQKGVNIIYRHRFVRTGYKAGNLKSAMACDYVKDYEFVAIFDADFQPNPDFLKQTIPHFKGNPEVGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGLFLEFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVKVPCELPESYQAYKKQQHRWHSGPMQLFRLCLPAIVTSKMGIWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPVWVICYIPIFMSLLNILPAPKSFPFLVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKTGSKVKEQKAPHLKKKKRNRLYRKELALAFLLLTASARSLLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMIDCKILYVIIVCNNEDISKESNFNTILEIRFFLE* 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28069278 28071952 + Vvi14g1401 Vvi14g1401 776468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1401 662 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 417 IPR029044 -
Vvi14g1401 662 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 1 560 - -
Vvi14g1401 662 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 561 628 - -
Vvi14g1401 662 Pfam Glycosyl transferase family group 2 294 496 IPR001173 -
Vvi14g1401 662 SUPERFAMILY Nucleotide-diphospho-sugar transferases 202 503 IPR029044 -
Vvi14g1401 662 PANTHER - 1 560 - -
Vvi14g1401 662 PANTHER - 561 628 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1401 K20887 - vvi:100244115 1219.91