Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1416 ATGGGAGAAGGAACAGAGGCTTTTCCAGATCTTGGAAGACACTGTCAACGTTCAGATTGCAATCAACTCGATTTTCTGCCGTTCAAATGTGATGGGTGTCACCAGGTGTTTTGCTTAGAACACAGAACATACAAGTCCCACGAGTGCCCCAAACCAGAACCCAACAGCAGGAAGGTGGTGGTGTGCGAAACCTGTTCGACATCGATCGAAACCACAGGGCGAGATGAAAAAGAAGAGAAGGCCATGTTAGAGAGGCATGAGAAGTCAGGGGACTGCGACCCGTCAAAGAAAAAGAAGCCAATTTGCCCAGTTCGGAGGTGCAAGGAGGTACTCACCTTCTCAAATACAAGTACCTGCAAAACTTGTCAACTCAACTTCTGCCTCAAGCATCGGTTCCCCATTGAACATGCTTGCAAGCAACGGTTGCCATCCTCGACAACGGGGGCTAAAGAGCGGTGGAGCGACAAGTTCTTGGCGGCGTTGGGGGCTAGGATTGGGAACGATTGCGCCAAGAATGGTGGGCGGACGGTGTCCCCACCTGGTACCAGTCATCCTGTCAAAGCGTGTTGA 570 51.23 MGEGTEAFPDLGRHCQRSDCNQLDFLPFKCDGCHQVFCLEHRTYKSHECPKPEPNSRKVVVCETCSTSIETTGRDEKEEKAMLERHEKSGDCDPSKKKKPICPVRRCKEVLTFSNTSTCKTCQLNFCLKHRFPIEHACKQRLPSSTTGAKERWSDKFLAALGARIGNDCAKNGGRTVSPPGTSHPVKAC* 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28172482 28173314 + Vvi14g1416 Vvi14g1416 776483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1416 189 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Vvi14g1416 189 Gene3D - 78 156 IPR035896 -
Vvi14g1416 189 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Vvi14g1416 189 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 5 151 - -
Vvi14g1416 189 SUPERFAMILY AN1-like Zinc finger 62 141 IPR035896 -
Vvi14g1416 189 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 151 - -
Vvi14g1416 189 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Vvi14g1416 189 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Vvi14g1416 189 Gene3D - 2 77 IPR035896 -
Vvi14g1416 189 SUPERFAMILY AN1-like Zinc finger 8 59 IPR035896 -
Vvi14g1416 189 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Vvi14g1416 189 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1416 - - vvi:100245574 412.92