Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1436 ATGGGTAATCAGGCCACTGGCGATGATGACAGCGTCAGTAGCAGTACTGTTACTAACTCTGATAATAATGCGATTAGCAATGTTGTCGATGAGGCAACCGAAAATCTGGAGAGTGCTGAGATTAACAATGGTGCAGATGAAACGACTAAGAATGTAGAGATTAGCAATGCGGAGGACGAAGCGAAGAAAGATGTGGAAACTACTGAGATTAGCAACGGGGATGCGGCTGAAGCAACCGAAAATGGGGAAAGTGTGGATTGTGTTGAAAGCGAGAAGAGTAGTTTGAGTTCCGCGAGTTATTCTAACAGTTCTGACGCCAATGAGACCAATTTCAGAAGTTTCTGCGCGTCGAAGCCCCATAGAGGCAACGACATCCGATGGGATGCGATACAGTGCGTCAAGGCTAAAGATGGGGACATGGGTTTGTGCCACTTTAGGCTTTTGAAGAAGCTGGGATGTGGGGATATTGGGAGTGTGTATTTGGCTGAACTGAGAGGAATGAGCTGTTTGTTTGCCATGAAGGTGATGGACAAAGGGATGCTAGAAGAGAGGAAGAAGTTGATGAGAGCCCAGACTGAGAGAGAAATATTGGGTTTGTTGGATCACCCATTTCTTCCAACCCTTTACTCGCATTTCGAAACGGAGAAGTTTTCTTGTTTATTGATGGAGTTCTGCAGCGGTGGGGATCTTCACACGCTGAGGCAGAGGCAACCGGGCAAGCATTTTTCTGAACAAGCAGCTAGGTTTTATGCTTCAGAAGTGCTTCTTGCTCTTGAGTATCTGCACATGTTGGGGGTGGTTTATAGAGATTTAAAGCCTGAAAATGTTTTGGTGAGGGAGGATGGCCACATCATGCTCTCAGATTTTGACTTATCGCTGAGATGCTATGTGAGTCCCACCCTTGTTCAAACCAGCAGTGACCCATCATTTAGGATATCTTCATACTGCATCCAGCCATCTTGCATTGATCCTGCATGCAAATTATCAGTCTGTGCTAAATCAAGGAAGCCCAGAAGTGAAAGATTAAGTTTGACAAATCTAGATTCACTTCCTATGCTGATTGCAGAACCAACTGGTGCCCGCTCCATGTCATTTGTTGGGACCCATGAATATTTAGCTCCTGAAATAATCAGAGGGGATGGTCATGGTAGTGCTGTTGATTGGTGGACTTTTGGTATTTTCTTGTATGAGTTACTACATGGGAGGACACCATTTAAAGGCAATGGGAACCGAGAGACATTGTTCAATGTTGTTGGCCAGTCTCTGAAGTTTGCTGAAGGATCCTCTATTAGTTTTGCTGCCAAGGACTTGATACGGGGTTTGCTTGTAAAGGATCCACAGAAGAGATTAGGATACAAAAGAGGTGCCACAGAGATCAAGCAGCATCCCTTCTTTGAAAGTGTCAACTGGGCTCTCATTCGCAGTACTCACCCTCCTCAAATCCCTAAACCTGTTGATCTTGAATGTCCTTACTTAGATTTTGAATTTTTCTAA 1494 44.65 MGNQATGDDDSVSSSTVTNSDNNAISNVVDEATENLESAEINNGADETTKNVEISNAEDEAKKDVETTEISNGDAAEATENGESVDCVESEKSSLSSASYSNSSDANETNFRSFCASKPHRGNDIRWDAIQCVKAKDGDMGLCHFRLLKKLGCGDIGSVYLAELRGMSCLFAMKVMDKGMLEERKKLMRAQTEREILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQPGKHFSEQAARFYASEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCYVSPTLVQTSSDPSFRISSYCIQPSCIDPACKLSVCAKSRKPRSERLSLTNLDSLPMLIAEPTGARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGRTPFKGNGNRETLFNVVGQSLKFAEGSSISFAAKDLIRGLLVKDPQKRLGYKRGATEIKQHPFFESVNWALIRSTHPPQIPKPVDLECPYLDFEFF* 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28373512 28375989 + Vvi14g1436 Vvi14g1436 776503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1436 497 Gene3D Phosphorylase Kinase; domain 1 144 224 - -
Vvi14g1436 497 PANTHER PROTEIN KINASE 12 489 - -
Vvi14g1436 497 SMART serkin_6 145 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1436 497 ProSiteProfiles Protein kinase domain profile. 145 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1436 497 MobiDBLite consensus disorder prediction 1 51 - -
Vvi14g1436 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Vvi14g1436 497 MobiDBLite consensus disorder prediction 1 91 - -
Vvi14g1436 497 Coils Coil 22 42 - -
Vvi14g1436 497 CDD STKc_phototropin_like 144 488 - -
Vvi14g1436 497 PANTHER FLIPPASE KINASE 1-RELATED 12 489 - -
Vvi14g1436 497 Pfam Protein kinase domain 362 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1436 497 Pfam Protein kinase domain 146 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1436 497 Gene3D Transferase(Phosphotransferase) domain 1 360 483 - -
Vvi14g1436 497 MobiDBLite consensus disorder prediction 52 70 - -
Vvi14g1436 497 SUPERFAMILY Protein kinase-like (PK-like) 124 486 IPR011009 -
Vvi14g1436 497 Gene3D Transferase(Phosphotransferase) domain 1 225 294 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76203 PF00069 Pkinase 9.70E-37 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1436 K08286 - vvi:100264610 952.199