Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1448 ATGGCCTTCGGGTTCCTCGGGGCTCTGGGTGATGGGTTTTCCATGCCAGTGGTTTTGTATGTGACCAGCGAGATTATGAATAATATCGGAAGTTCCTCAACTTCTGCTGCTGATGCCTTCGTTGATAAAATCAACGAGGTCCTTTTGACTTTGTTGTACATTGCTTGTGGGTCATGGGTTGCTTGTTTCCTAGAGGGTTATTGCTGGTCAAGAACAGCAGAGAGACAAACCACAAGGATGAGGGCTAGATATCTGAAAGCAGTGCTGAGGCAGGACGTGGGCTATTTCGATTCGCATGTGACCAGCACAGCAGAGGTCATCACCAGCATCTCCAACGATACTCTCGTGATTCAAGATGTTCTTAGCGAAGGTTGGTTCTTTCAATGCTGCTGTGGAAGTGTAGAGTCCGTCGTCGTTCTGGATGAGGTCGTGGTGAGAGCCGGTCTCCATGATCTGGCCATTCTGGACGACAGCGATGATGTCCGCATGGGCCTAGTGAGCCAAGAACCAGCACTTTTTGCAACCACCATTAAAGAGAACATACTTTTCGGAAAAGAGGACGCTATCATGGAGGAGGTGGTTGCTGCTGCCAAAGCTTCAAATGCTCAAAATTTCATTTGTCAGTTGCCTCAGGGGTATGATACCCAGGTAGGGAAGAGAGGAGTTCAGATGTTAGGAGCACAGAAGCAAAGAATCGCCATTGCATCCGCCATCATCAAAGCCCCACAAATCCTCTTCCTCGATGAGGCAACCAACGCGTTAGACTTCGAGTTGGAGCGAGTTGTCCAAGAAGCCTTAGACAAAGCGGTCGTTGGCCGCACCACCATCATCACCGCCCACTGCTTCTCCACCATCCACAACGCGGACATCATCGTTGTCGTCCAGAATGGCTAG 894 49.89 MAFGFLGALGDGFSMPVVLYVTSEIMNNIGSSSTSAADAFVDKINEVLLTLLYIACGSWVACFLEGYCWSRTAERQTTRMRARYLKAVLRQDVGYFDSHVTSTAEVITSISNDTLVIQDVLSEGWFFQCCCGSVESVVVLDEVVVRAGLHDLAILDDSDDVRMGLVSQEPALFATTIKENILFGKEDAIMEEVVAAAKASNAQNFICQLPQGYDTQVGKRGVQMLGAQKQRIAIASAIIKAPQILFLDEATNALDFELERVVQEALDKAVVGRTTIITAHCFSTIHNADIIVVVQNG* 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28492641 28495551 + Vvi14g1448 Vvi14g1448 776515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1448 297 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 162 297 - -
Vvi14g1448 297 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 123 - -
Vvi14g1448 297 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 123 IPR039421 -
Vvi14g1448 297 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 162 297 IPR039421 -
Vvi14g1448 297 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi14g1448 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 297 IPR027417 -
Vvi14g1448 297 Gene3D - 163 297 IPR027417 -
Vvi14g1448 297 Pfam ABC transporter transmembrane region 2 123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi14g1448 297 Gene3D ABC transporter type 1, transmembrane domain 1 140 IPR036640 GO:0005524|GO:0016021
Vvi14g1448 297 Pfam ABC transporter 161 252 IPR003439 GO:0005524
Vvi14g1448 297 SUPERFAMILY ABC transporter transmembrane region 1 126 IPR036640 GO:0005524|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1448 K05658 - vvi:100854950 225.713