Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1448 | ATGGCCTTCGGGTTCCTCGGGGCTCTGGGTGATGGGTTTTCCATGCCAGTGGTTTTGTATGTGACCAGCGAGATTATGAATAATATCGGAAGTTCCTCAACTTCTGCTGCTGATGCCTTCGTTGATAAAATCAACGAGGTCCTTTTGACTTTGTTGTACATTGCTTGTGGGTCATGGGTTGCTTGTTTCCTAGAGGGTTATTGCTGGTCAAGAACAGCAGAGAGACAAACCACAAGGATGAGGGCTAGATATCTGAAAGCAGTGCTGAGGCAGGACGTGGGCTATTTCGATTCGCATGTGACCAGCACAGCAGAGGTCATCACCAGCATCTCCAACGATACTCTCGTGATTCAAGATGTTCTTAGCGAAGGTTGGTTCTTTCAATGCTGCTGTGGAAGTGTAGAGTCCGTCGTCGTTCTGGATGAGGTCGTGGTGAGAGCCGGTCTCCATGATCTGGCCATTCTGGACGACAGCGATGATGTCCGCATGGGCCTAGTGAGCCAAGAACCAGCACTTTTTGCAACCACCATTAAAGAGAACATACTTTTCGGAAAAGAGGACGCTATCATGGAGGAGGTGGTTGCTGCTGCCAAAGCTTCAAATGCTCAAAATTTCATTTGTCAGTTGCCTCAGGGGTATGATACCCAGGTAGGGAAGAGAGGAGTTCAGATGTTAGGAGCACAGAAGCAAAGAATCGCCATTGCATCCGCCATCATCAAAGCCCCACAAATCCTCTTCCTCGATGAGGCAACCAACGCGTTAGACTTCGAGTTGGAGCGAGTTGTCCAAGAAGCCTTAGACAAAGCGGTCGTTGGCCGCACCACCATCATCACCGCCCACTGCTTCTCCACCATCCACAACGCGGACATCATCGTTGTCGTCCAGAATGGCTAG | 894 | 49.89 | MAFGFLGALGDGFSMPVVLYVTSEIMNNIGSSSTSAADAFVDKINEVLLTLLYIACGSWVACFLEGYCWSRTAERQTTRMRARYLKAVLRQDVGYFDSHVTSTAEVITSISNDTLVIQDVLSEGWFFQCCCGSVESVVVLDEVVVRAGLHDLAILDDSDDVRMGLVSQEPALFATTIKENILFGKEDAIMEEVVAAAKASNAQNFICQLPQGYDTQVGKRGVQMLGAQKQRIAIASAIIKAPQILFLDEATNALDFELERVVQEALDKAVVGRTTIITAHCFSTIHNADIIVVVQNG* | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 28492641 | 28495551 | + | Vvi14g1448 | Vvi14g1448 | 776515 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1448 | 297 | PANTHER | ABC TRANSPORTER B FAMILY PROTEIN | 162 | 297 | - | - | |
Vvi14g1448 | 297 | PANTHER | ABC TRANSPORTER B FAMILY PROTEIN | 1 | 123 | - | - | |
Vvi14g1448 | 297 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 1 | 123 | IPR039421 | - | |
Vvi14g1448 | 297 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 162 | 297 | IPR039421 | - | |
Vvi14g1448 | 297 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 2 | 123 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Vvi14g1448 | 297 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 162 | 297 | IPR027417 | - | |
Vvi14g1448 | 297 | Gene3D | - | 163 | 297 | IPR027417 | - | |
Vvi14g1448 | 297 | Pfam | ABC transporter transmembrane region | 2 | 123 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Vvi14g1448 | 297 | Gene3D | ABC transporter type 1, transmembrane domain | 1 | 140 | IPR036640 | GO:0005524|GO:0016021 | |
Vvi14g1448 | 297 | Pfam | ABC transporter | 161 | 252 | IPR003439 | GO:0005524 | |
Vvi14g1448 | 297 | SUPERFAMILY | ABC transporter transmembrane region | 1 | 126 | IPR036640 | GO:0005524|GO:0016021 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1448 | K05658 | - | vvi:100854950 | 225.713 |