Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1460 ATGATGGCAGTCCCAATCCCATCCCGTCAACTCTTCATCGACGGAGAGTGGAGAGAGCCACTCTTGAAAAAGAGAATTCCGATCATCAACCCTGCCACGCAAGAAATCATTGGTGACATCCCTGCAGCTACCGCTGAAGATGTGGATATTGCAGTTGAAGCTGCCCGCAGAGCTTTCTCTAAGCCTGATTCTTGGGCCTCTACTTCTGGTTCTTTTCGTGCCAAGTTCTTGCGGGCCATCGCCGATAAGATATTGGAGAGGAAGATTGAACTGGCCAAATTAGAAGTTGTTGACTGTGGAAAGCCAATTGATGAAGCAATATCTGATATGGTTTCTGTTGCTGGGTGTTTCAAGTATTATGCAGAACTTGCAGAAGCTTTAGATGCAAAGCAAAGGATTCCTATCTCTATTCCTATGGAATCATTTAAGACTCATGTTCTTAAAGAGCCAATTGGAGTTGTTGCGCTGATCACTCCTTGGAACTACCCTCTTTTGATGGCTGCATGGAAAGTTGCTCCTGCTCTGGCTGCTGGCTGTACTGCTATACTGAAGCCATCTGAATTGGCATCTGTGACTTGTTTGGAGTTAGCTGAAGTTTGTAGAGATGTGGCTCTTCCTCCTGGCGTGCTAAACATTTTGACTGGATTAGGCCCAGAAGCCGGTGCTCCTCTGGCATCTCATCCTCATGTTGATAAGATTGCATTTACTGGAAGCACTGCAACAGGAATCAAAATCATGACAACTGCAGCTCAAACGATCAAGCCTATTTCACTAGAGCTTGGTGGAAAGAGTCCAATTCTTGTGTTTGAGGATGTAGATCTTGATAACGCCATAGAATGGACTCTTTATGGTTGCTTTCCAAATAATGGTCAAATCTGCAGTGCAACTTCCCGGCTTCTTGTTCATGAAAATATTGCAGCAAAATTCGTGGAAAAACTCATTCAATGGAGTAAAAGCATCAAAATTTCAGATCCACTGGAAGAAGGTTGCAGGCTTGGCGCTATTGTTAGTGAAGGACAGTATGAGAAGATACTGAATTTTATTTCAACCGCTAAGAGTGAAGGTGCTACCATTCTGTATGGAGGAGTCCGCCCTCAGCATTTGAAGAAAGGATTCTTTATTGAACCGACCATCATAACAGATGTTAGTACCTCCATGCAAATTTGGAGGGAGGAGGTTTTTGGACCTGTTTTATGTGTCAAAACATTTGCCACTGAAGAAGAAGCCACTCAACTAGCCAATGATACTCATTACGGGTTGGGAGCTGCTGTGGTTTCCAATGATCTAGAAAGGTGTGAGCGCTTGACCAAGGTTCTTCAGGCAGGGGTTGTATGGGTGAACTGCTCTCAACCCTGCTTTGATCAAGCTCCTTGGGGAGGCATTAAGCATAGCGGTATTGGGCGTGAATTAGGGGAATGGGGCCTTGAAAACTACTTGACTGTAAAGCAAGTCACACAGTACACCTCTGATAAGCAATGGGGTTGGTATTCTCCTCCATAA 1500 44.6 MMAVPIPSRQLFIDGEWREPLLKKRIPIINPATQEIIGDIPAATAEDVDIAVEAARRAFSKPDSWASTSGSFRAKFLRAIADKILERKIELAKLEVVDCGKPIDEAISDMVSVAGCFKYYAELAEALDAKQRIPISIPMESFKTHVLKEPIGVVALITPWNYPLLMAAWKVAPALAAGCTAILKPSELASVTCLELAEVCRDVALPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSTATGIKIMTTAAQTIKPISLELGGKSPILVFEDVDLDNAIEWTLYGCFPNNGQICSATSRLLVHENIAAKFVEKLIQWSKSIKISDPLEEGCRLGAIVSEGQYEKILNFISTAKSEGATILYGGVRPQHLKKGFFIEPTIITDVSTSMQIWREEVFGPVLCVKTFATEEEATQLANDTHYGLGAAVVSNDLERCERLTKVLQAGVVWVNCSQPCFDQAPWGGIKHSGIGRELGEWGLENYLTVKQVTQYTSDKQWGWYSPP* 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28602115 28607484 - Vvi14g1460 Vvi14g1460 776527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1460 499 CDD ALDH_F10_BADH 28 486 - -
Vvi14g1460 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 457 IPR016163 GO:0016620
Vvi14g1460 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 258 265 IPR029510 GO:0016491
Vvi14g1460 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 499 - -
Vvi14g1460 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 482 IPR016162 GO:0016491
Vvi14g1460 499 Pfam Aldehyde dehydrogenase family 24 484 IPR015590 GO:0016491
Vvi14g1460 499 SUPERFAMILY ALDH-like 5 486 IPR016161 GO:0016491
Vvi14g1460 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 286 297 IPR016160 GO:0016491
Vvi14g1460 499 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 2 499 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1460 Vvi17g685 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1460 K00130 - vvi:100250859 1004.97