Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1467 ATGGGACGCAAGAAGCGAGTCAAGCCTTCTTCTTCTTGTTCTGCCCCTGCGGCGGCCGTGGGTGTCAAGGCAGCTTTCCCGTCCGCTTCCTCACTCTCCCATGGGTCCCCCAATAAGGAAGCAAAGAAAGCAGCAGAAATGGAGGCAATCAAGCTCGATTGCGACCGCGCGTTTGATGCTTTCCGGCGTGGAAACCACCATAAAGCCCTAAAGCTCATGAAAAAGTTTTGTTCGAGCTACCCGAACTCTGGTTTTGTTCATACTCTTCAAGGTACCATGTATTACCAACTCGCTCTTACAATTGCCGATTCTAGTACCAAACTCCAATACCTCAAGACTGCAGCGGACTCTGCCTCGCGAGCCACGCTGCTCTCACCCGAGAAGATGGATTCCGCCCATTTCTTTGCGCATTTGCTCTATTTGACGTCGGAGAAAAATGATGGATACCAAGAAGTTGTGCGAGAGTGTGAAAGGGCGTTGTCAATTCCAGTGGAGAAGGCTAGTTTACTTGTGGGGCGGAATCAATTAGAAGGGTCGATTCTCATGGCACAAATTTCAGAACTTCAAGAGGGCCTGCGGTCACTGATTGGAATGTCAAACGAGACCATGAATAACGGTGTGCATTTGGATTTGGAAGCTAAGTTTATGTTGGTTCCTTTTTCCGATCTTTTGAAAGAGAGTAAGTTGCTTAGTTTAAAATATTCTGAGGATGGTATGGAATTGAAAGATCTTGAGGAAAGAGAGAAGGAGATTGAGGCTAAGATTCAAAAAACAAAGCTTTTGGAGAACTTGCGGGTATTACCAGAATGGCAAACAGAGGAAGCTAGTCTGCAAAATTATCTGAAAGATGGAGTGCCTGAGTCGTCTTCCAGGTCTTCTTACAAACAAGAAAAGATAAAAAGGGTCTCAAATCTTAAAAAGATGAAGGAATCGGCACGTATGATGCCTTATGTTGTGATGTATTGGGACTCGATCAGTTTTGATCAGAAGAGGAGATTGCTCAATGTGAGAATTGGGGATCTAATAGAGTATTTTGGTTCAAACGAGTATGTTGAGGAAGCGCTGATTTTCTGTGAAGCCATGAGTTTTGCAAAGGATAACAAGAGCTGGAAGTTTTTGGGATGTTGTTTTTGCAGTCAGAGATTTAAGGAATTAATACCTTATCTGAAACATCTTGAGGTGCAGCATCTGCGGAATGTTAAGGTTTTAGCACCCGAGATGATGTCAATGTTACCACTAGAACTTAATAGTTATTGGGTTGACATGCTATTGAAGGATAGGTGGAAGCCAGTGGACACTTCTGCAGCTCTGAAAATGATTGAAAGTGGTCCGAAAGGCGAGTTATCTTGTACTGTTGGTGGTGACAGAGAGTCCCATGGAGGGGAGGTTGGTGGTGATCAAAATATCAAGGAAGTTGATGGAGAAAAAGGGTTGCCTGATGCCTTCCCTTTCGACCATAACTGGCCATTATCTTATGATTCTGAGCGTGCAGGGATCCTTTCGAAAATCCATATCATGTTCAAATTGTTTTTTAGACACAACTATCTCTCTGAAAGACTTCTTAAGGTGTTGATTAAGTACTCCTTGGAAAAGCTGCAGACACTTGTTCCAGAATTGGAGCCTTTAATTCAAGGACTGGACCAAACACCTTTGTGCCTCTGCTTTTTGCAAGTTCCTCAGCTCAGATATGTCTATAGTTATTTGGAGGATTTGGTTCGTCTTTGTAGGTTAGATTTTCGTTCAGAGAAGGATGGGTCCGTGGCTGAGACGCCCAGGGGAGGTTTTGACATCAAACACAGGATTGGTCTTTCTAGTGAATCAGTATCTCTCCTTTTGGATAAACACTCGAATAGGGGAGCGGTTGATTTCTTCACTTATCATGACAACATTTCTGCTGATGCTTCTTCAGTAGCTTTTACTGTTGATAATCTTGAAGATGATGCACTTCCAGGCAGTGATTCTTTAGCAGCTTGGATATTCGGGGGTCCTTCAAATGAACAACAATTGACATCATGGGCTCGTGCATTACAAGAGAAAAAACATCAAGCGATAGACATTTTGAGTATCCTCGAGAAGGAATTTCCTGAATATAAAAGCTTGTGTGATAGTAAATGTATTCATTTACGTCAAGAAGAAGCATTTCAGGCAGTCGAGAATATCTTGGCCGAGGAATTCACAAAGAGGAGGGAAAACTTGGAGTTTGTCCCGCAAGGTTATGAGGTCCTCTTGAAGAAGCGGCAAGAAGAGCTTGCTAGGACGTCTAATGATGTGTTTGGCAGTGATGCGGCTGAGTTCACTTTCATATCAAAGGTTCTTAAAGAAGTAGAAGCTCTGAGTCTAAGAGTAGCCGGTGGGACTTCTCATTTATCTGATCAGGAAAGTGATCAAGAAGATGAGAGCAAGACGTTCGAAGACCTGCTTGAGCAGGATAGTTTGTTAGAAATGGCAGTCCAAGATCAGAAAGAAGAGGTGTCTTTGAAGGTAGGTGTCCCAACCTTTTTAATTTTGATATATAATGAAAAATGTCAAATTCTTCCTAAATTTATAAACTACTCCATGAATTGTACTTTCTCTTGTGCAGGATTGCCTGGTGGGAGAACTTCTGAAGACAGTGTTTTGTCTCCTGATCAAAGAGGATCACAATGCACATTCGACGACATGAATGCATCAGATGTACATGGGACTAGTCTGAAAAAAAGTCTTGCTCAATACGATTGCTTCTTAGATGTGATCATAACGCAGTCACTTTGGCATTTGAGATGGTTCCGATTTGAGTTGCAACGAAGAAGAGAAATCCCTCATGCTCATGCTGGAAACCCATGTGTTTTCTGTTCATTATGCAATACTTTTACAGTCTTAAGTCTCTCACCAGTATGTTGGAAAAAAGATGTTGTTGCTCCATGCCTTGCAAAGATGGCTTTGAGTGACTTGTACCCTGATAATATTTTCTTCCAGGAGGCACAAACAAATGATGTTATTTCAATCTTGGTTGGAATTTTTGAATGTCTTCATCAGTCATTTTCTGCGCCAGGAGAAAAATATAGCGGAGAAAATTGGGATTGTACATCGGATGAGTGCTTAGCACATACTATCATTGGAATGAACCTTTTGGAAAGAATAAGCTGTTGCTATTGCGGTCTTGAGTCTGGGAATGAGCAGTTTACTTCATTTCTTCGCATGGATACGTACATGGATAGCTCATTTGACAAGCTTTTGAAGCTTGTAAATGCAAGTAGTCTATTCCCTTGTGATCCAGAGGCAGGAGGCTGTGGGAAACTCAATCCTACTCAGCATTTTCTTTCGAGTCCTCCTCATGTGTTCATAACTGGTATGTGGCAGAATGGTCATGAGCGCGGGGCGGATATATCAACAACATTGGCTGCTTTGTCTACTAAGATAGATCTCGGTATCCTATATGAAGGTTTAGATGAAGGGAACACGCATTACCTCATTTCTTTGGTTTGTTTTACTGGGAAAAATTATCGGTGCTTTGCTTACCGTCACGAGGTTGAAAAATGGATTATGCTTGATGATGAAGAATGTAAGGTCATTGGTTGTTGGAACGATGTTATTACCGTTTGCAGAACAAGGAATTTACAACCTCTGATTCTTTTCTTTGAAGATGAAATGCAGATTTTTTAA 3642 41.93 MGRKKRVKPSSSCSAPAAAVGVKAAFPSASSLSHGSPNKEAKKAAEMEAIKLDCDRAFDAFRRGNHHKALKLMKKFCSSYPNSGFVHTLQGTMYYQLALTIADSSTKLQYLKTAADSASRATLLSPEKMDSAHFFAHLLYLTSEKNDGYQEVVRECERALSIPVEKASLLVGRNQLEGSILMAQISELQEGLRSLIGMSNETMNNGVHLDLEAKFMLVPFSDLLKESKLLSLKYSEDGMELKDLEEREKEIEAKIQKTKLLENLRVLPEWQTEEASLQNYLKDGVPESSSRSSYKQEKIKRVSNLKKMKESARMMPYVVMYWDSISFDQKRRLLNVRIGDLIEYFGSNEYVEEALIFCEAMSFAKDNKSWKFLGCCFCSQRFKELIPYLKHLEVQHLRNVKVLAPEMMSMLPLELNSYWVDMLLKDRWKPVDTSAALKMIESGPKGELSCTVGGDRESHGGEVGGDQNIKEVDGEKGLPDAFPFDHNWPLSYDSERAGILSKIHIMFKLFFRHNYLSERLLKVLIKYSLEKLQTLVPELEPLIQGLDQTPLCLCFLQVPQLRYVYSYLEDLVRLCRLDFRSEKDGSVAETPRGGFDIKHRIGLSSESVSLLLDKHSNRGAVDFFTYHDNISADASSVAFTVDNLEDDALPGSDSLAAWIFGGPSNEQQLTSWARALQEKKHQAIDILSILEKEFPEYKSLCDSKCIHLRQEEAFQAVENILAEEFTKRRENLEFVPQGYEVLLKKRQEELARTSNDVFGSDAAEFTFISKVLKEVEALSLRVAGGTSHLSDQESDQEDESKTFEDLLEQDSLLEMAVQDQKEEVSLKVGVPTFLILIYNEKCQILPKFINYSMNCTFSCAGLPGGRTSEDSVLSPDQRGSQCTFDDMNASDVHGTSLKKSLAQYDCFLDVIITQSLWHLRWFRFELQRRREIPHAHAGNPCVFCSLCNTFTVLSLSPVCWKKDVVAPCLAKMALSDLYPDNIFFQEAQTNDVISILVGIFECLHQSFSAPGEKYSGENWDCTSDECLAHTIIGMNLLERISCCYCGLESGNEQFTSFLRMDTYMDSSFDKLLKLVNASSLFPCDPEAGGCGKLNPTQHFLSSPPHVFITGMWQNGHERGADISTTLAALSTKIDLGILYEGLDEGNTHYLISLVCFTGKNYRCFAYRHEVEKWIMLDDEECKVIGCWNDVITVCRTRNLQPLILFFEDEMQIF* 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28679520 28688251 - Vvi14g1467 Vvi14g1467 776534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1467 1213 PANTHER UBIQUITIN SPECIFIC PROTEINASE 875 1209 - -
Vvi14g1467 1213 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 827 - -
Vvi14g1467 1213 Coils Coil 234 264 - -
Vvi14g1467 1213 CDD Peptidase_C19 990 1207 - -
Vvi14g1467 1213 PANTHER ECHINUS SPLICE FORM 3 1 827 - -
Vvi14g1467 1213 PANTHER ECHINUS SPLICE FORM 3 875 1209 - -
Vvi14g1467 1213 Pfam Protein of unknown function (DUF627) 57 162 IPR006866 -
Vvi14g1467 1213 Gene3D Cysteine proteinases 902 1209 - -
Vvi14g1467 1213 SUPERFAMILY Cysteine proteinases 906 1207 IPR038765 -
Vvi14g1467 1213 Coils Coil 673 693 - -
Vvi14g1467 1213 Pfam Protein of unknown function (DUF629) 319 815 IPR006865 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1467 Vvi17g486 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1467 - - vvi:104881683 1607.81