Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1482 ATGAAAAATATGAAGACTACTTTCATATTTAGTAATTTGGTGGTGGTGGTGGTGGTGATGGTGATGATGAACATGGTGTTCACACATGGTGCTCATGTTCATCCTTCTTCTAATCAATCACAGGTTGAGAAGGAAGCACTGCTTGAGTCCGGTTGGTGGAGTGGGGAGACTGATCATGATCATGATTCTGATCATTGCGACTGGTCTGGCATAACTTGCAACGAGGAGGGACATGTCATTGCAGTTTACTATAGAGCCAGCGGTGAACTTAGCAAACTAAAGTTTTCTTCATTTCCCAGCCTCAGAACCATCGATCTTCACGACGGTAGACTCAGTGGCAGAATCCCACACCAAATAGGTTCTCTTACTAAGGTCATTTATCTTGATCTCTCTCGTAATGAACTCAGTGGTAGTATCCCAGACCAAATAGCTACTCTTACTAAGCTCACTTACCTTGATCTCTCTAGGAATGAACTCAGTGGTAGCATACCGCCCCAAATAAACACTCTTACTAGCCTCAACTACCTCGATCTTTCCCATAATGAGCTCAATGGTAGGATCCCGCAACAAATAGGAACTCTTATTAGACTCACCCACCTCGATCTCTATAGCAATGAACTTAGCGGTAGCATCCCAGACGAGATAGATACTCTTACTGAACTCGCCTACCTCGATCTCTCTAACAATGTACTCAATGGCAGCATCCCACACCAACTAGGTGCTCTCGCTAAACTCACCTACTTTGATCTCTCTTGGAATGAACTCAGTGGTGACATCCCTTCATCTTTTGGCCATCTTTCCAATTTAATTTCTCTATGTCTCAATAATAATCAAATCAACGGCCCCATCCCTGAAGATATTGGAAACCTCGAGGACTTGGTTGATTTGGACTTAAGTAGTAACTCGATCAGTGGGAAGATACCATCCCAAATCCAAAACTTGAAGAGCGCAGCAGAAACAAGAAGGGGAGATTTGTTCTCCGTATGGGACTATGATGGAACAATTGCTTACCAAGACATAATCCAATCAACGGAGAATTTTGACATCAAATATTGTGTAGGTGTTGGAGGATATGGCAGCGTTTACAGGGCACAACTGCCATGTGGAAAAGTTGTAGCCTTGAAGAAGCTTCATGGATGGGAAAGGGAGGAGCCCACCTACCTGAAAAGTTTTGAAAATGAGGCACAAATATTGTCCAAGATACGACATCGAAACATTAGGCTGAATGTTGTCAAAAGTATTGCCCATGCTTTATCTTACATGCATCATGATTGTTCCCCACCCATCATTCACAGGGACATATCAAGCAATAATGTCCTCTTGAATTCACAACTTGAAGCTTTTGTATCAGATTTTGGCACCGCTAGACTACTAGATCCTGATTCATCCATTCAGACTCTTCTTGTAGGCACTTATGGGTATATTGCACCAGAGCTTGCCTACACCATGACCGTAACTAAAAAATGCGATGTGTATAGTTTTGGAGTGGTGGCACTTGAGACAATGATGGGGAAACATCCAAGAGAAGTTATCACTTCATTGTCTTCCTCCTCGGGTCAAGATATATTGTTGAGGGATGTATTAGATCCACGTCTTGCACTTCCAGAAAACCCACAAGTTGCTAAAGATATAGTTTTTGTGGTGCTTTTGGCACTTAAATGCATCCATTCAAATCCACAATCCCGTCCAACAATGCAACAGATATCCTACAAGCTTCTTGGTGACATTCCATTTCCTAAATTGCCTGGTACTGTACAAGAGTTGACTTCTTTGGACCTTAGTATGAATCAAATCAATGGATCCATCCCTCCAGAAATTGGAAATCTTAAGGATCTAGTCACTTTAGACCTTTCTAATAATTTAATCAGTGGAGAGATACCTTCAAACCTGAAAATTTTGAAGAGATTATGGCTCTTAGATCTCTCGTATAATAGATTACAACTTCAACCAGAGTCAATGCCAGTAAAAAAAAGAAGAGGAGACTTGTTTTCCATATGGGACTATGATGGGAGAATTGCTTTTGAAGACATCATCTTGGCAACAGAGGATTTCGATATCAGATATTGCATAGGTGTTGGAGGCTATGGCAGTGTTTATAGAGCACAACTGCCCAGTGGAAAAGTGGTTGCTGTGAAGAAACTTCATCGATCAGAAATAGACGAGCCGACATACTTGAGAAGTTTTAAGAATGAGGTGCGGATGTTAGAACAAATACGACATCGAAACATTGTCAAACTTCATGGTTATTGTCTACATAATAGGTACATGTTTCTCATTTATATGTACATGGAAAGGGGAAGCTTGTATTCTATGCTGAGCGATGAGGTTGAGGCTGTTGAATTGGATTGGGTTAAGAGGGTGAATATTTTTAAAAATATGGCCCATGCATTATCCTACATGCATCATGATTGTATCCCACCAATCATTCATCGGGACATATCAAGTAATAACATCCTTTTAGATTCAAAACTTGAGGGTTTCGTATCAGATTTTGGTACAGCGAGATTATTAGACCCCGATTCGTCCAATCAAACCCTTGTTGTTGGCACCTATGGCTACATTGCACCGGAGCTTGCCTGCACAATGGTTGTGACCGAAAAATGTGATGTATATAGCTTTGGGGTGGTGGCACTAGAGACAATGATAGGGAAGCATCCTGGAGAACTTATCACCTCATTATCATCATCGTTATGTCAGGATATAATGTTGAGGGATGTATTAGATTCACGTCTATCACTTCCTGAAGATCTTCAAGTTGCTAAAGATGTAGTTTTTGTGATACTTTTGGCTCTCAAATGCATCCATTCAAATCCGCAATCTCGTCCAACAATGCAACAAGTATCCTACAAACTTCTTAGTAACATACCATTTCCTAAGTCACCATTTTATGCAATTTCCCTCCATGAATTGAAGAATCAAGAAATGTAA 2928 40.85 MKNMKTTFIFSNLVVVVVVMVMMNMVFTHGAHVHPSSNQSQVEKEALLESGWWSGETDHDHDSDHCDWSGITCNEEGHVIAVYYRASGELSKLKFSSFPSLRTIDLHDGRLSGRIPHQIGSLTKVIYLDLSRNELSGSIPDQIATLTKLTYLDLSRNELSGSIPPQINTLTSLNYLDLSHNELNGRIPQQIGTLIRLTHLDLYSNELSGSIPDEIDTLTELAYLDLSNNVLNGSIPHQLGALAKLTYFDLSWNELSGDIPSSFGHLSNLISLCLNNNQINGPIPEDIGNLEDLVDLDLSSNSISGKIPSQIQNLKSAAETRRGDLFSVWDYDGTIAYQDIIQSTENFDIKYCVGVGGYGSVYRAQLPCGKVVALKKLHGWEREEPTYLKSFENEAQILSKIRHRNIRLNVVKSIAHALSYMHHDCSPPIIHRDISSNNVLLNSQLEAFVSDFGTARLLDPDSSIQTLLVGTYGYIAPELAYTMTVTKKCDVYSFGVVALETMMGKHPREVITSLSSSSGQDILLRDVLDPRLALPENPQVAKDIVFVVLLALKCIHSNPQSRPTMQQISYKLLGDIPFPKLPGTVQELTSLDLSMNQINGSIPPEIGNLKDLVTLDLSNNLISGEIPSNLKILKRLWLLDLSYNRLQLQPESMPVKKRRGDLFSIWDYDGRIAFEDIILATEDFDIRYCIGVGGYGSVYRAQLPSGKVVAVKKLHRSEIDEPTYLRSFKNEVRMLEQIRHRNIVKLHGYCLHNRYMFLIYMYMERGSLYSMLSDEVEAVELDWVKRVNIFKNMAHALSYMHHDCIPPIIHRDISSNNILLDSKLEGFVSDFGTARLLDPDSSNQTLVVGTYGYIAPELACTMVVTEKCDVYSFGVVALETMIGKHPGELITSLSSSLCQDIMLRDVLDSRLSLPEDLQVAKDVVFVILLALKCIHSNPQSRPTMQQVSYKLLSNIPFPKSPFYAISLHELKNQEM* 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28813585 28826094 - Vvi14g1482 Vvi14g1482 776549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1482 975 ProSitePatterns Tyrosine protein kinases specific active-site signature. 808 820 IPR008266 GO:0004672|GO:0006468
Vvi14g1482 975 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 407 582 - -
Vvi14g1482 975 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 655 970 - -
Vvi14g1482 975 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 39 316 - -
Vvi14g1482 975 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 583 647 - -
Vvi14g1482 975 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 316 406 - -
Vvi14g1482 975 SUPERFAMILY L domain-like 61 316 - -
Vvi14g1482 975 Gene3D Ribonuclease Inhibitor 193 260 IPR032675 -
Vvi14g1482 975 Gene3D Ribonuclease Inhibitor 575 656 IPR032675 -
Vvi14g1482 975 Pfam Leucine rich repeat 244 303 IPR001611 GO:0005515
Vvi14g1482 975 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Vvi14g1482 975 PRINTS Leucine-rich repeat signature 149 162 - -
Vvi14g1482 975 PRINTS Leucine-rich repeat signature 170 183 - -
Vvi14g1482 975 ProSiteProfiles Protein kinase domain profile. 347 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1482 975 SMART LRR_sd22_2 290 316 - -
Vvi14g1482 975 SMART LRR_sd22_2 146 178 - -
Vvi14g1482 975 SMART LRR_sd22_2 242 257 - -
Vvi14g1482 975 SMART LRR_sd22_2 609 632 - -
Vvi14g1482 975 SMART LRR_sd22_2 266 289 - -
Vvi14g1482 975 SMART LRR_sd22_2 194 217 - -
Vvi14g1482 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 583 647 - -
Vvi14g1482 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 407 582 - -
Vvi14g1482 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 655 970 - -
Vvi14g1482 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 316 406 - -
Vvi14g1482 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 39 316 - -
Vvi14g1482 975 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Vvi14g1482 975 Gene3D Transferase(Phosphotransferase) domain 1 763 956 - -
Vvi14g1482 975 Gene3D Phosphorylase Kinase; domain 1 329 409 - -
Vvi14g1482 975 SUPERFAMILY Protein kinase-like (PK-like) 332 570 IPR011009 -
Vvi14g1482 975 Gene3D Transferase(Phosphotransferase) domain 1 410 574 - -
Vvi14g1482 975 Gene3D Ribonuclease Inhibitor 261 322 IPR032675 -
Vvi14g1482 975 Gene3D Phosphorylase Kinase; domain 1 657 762 - -
Vvi14g1482 975 Gene3D Ribonuclease Inhibitor 37 191 IPR032675 -
Vvi14g1482 975 SUPERFAMILY Protein kinase-like (PK-like) 669 949 IPR011009 -
Vvi14g1482 975 Pfam Protein kinase domain 409 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1482 975 Pfam Protein kinase domain 689 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1482 975 ProSitePatterns Tyrosine protein kinases specific active-site signature. 429 441 IPR008266 GO:0004672|GO:0006468
Vvi14g1482 975 SMART LRR_typ_2 585 609 IPR003591 -
Vvi14g1482 975 SMART LRR_typ_2 633 656 IPR003591 -
Vvi14g1482 975 SMART LRR_typ_2 266 290 IPR003591 -
Vvi14g1482 975 SMART LRR_typ_2 218 242 IPR003591 -
Vvi14g1482 975 SMART LRR_typ_2 146 169 IPR003591 -
Vvi14g1482 975 SMART LRR_typ_2 170 194 IPR003591 -
Vvi14g1482 975 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Vvi14g1482 975 SUPERFAMILY L domain-like 577 652 - -
Vvi14g1482 975 ProSiteProfiles Protein kinase domain profile. 684 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76206 PF00069 Pkinase 4.30E-45 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1482 - - vvi:104881686 683.715