Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1487 | ATGTTCTCTACAAATATTATATTTCTATCCTTAAAAATAGAAAACAGAGAATGGTTTTTTTTTTTTTTTTTTCAGCAACAGCAGCTGCCAAACCAACAACCTGATCAAGCATCTGCTGCTACCACTGTGAAGAGAAGTTCAAGATTTCGCGGTGTCAGCAGGCATAGATGGACAGGTCGGTTTGAAGCTCACTTGTGGGATAAGTTTTCTTGGAATGTAACACAGAAGAAGAAAGGGAAACAAGGAGCCTATGATGAAGAAGAATCTGCAGCCAGAGCATATGATTTAGCTGCACTCAAGTATTGGGGGGCATCAACTTTCACGAATTTTCCGGTTTCAGATTATGAGAAAGAGATTGAGATAATGCAGTCGGTGACAAAAGAAGAGTACCTAGCCTGTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGGGGTGTGTCTAAGTACAGGGGAGTAGCAAGGCATCATCACAATGGGAGATGGGAAGCAAGGATTGGGAGAGTTTTCGGAAATAAATACCTCTACCTTGGCACATACAGTACACAAGAGGAGGCTGCTCGAGCCTATGATATTGCAGCAATCGAATACAGAGGGATCAATGCTGTGACCAACTTTGATTTGAGCACATATATCAGGTGGCTAAATCCAGCAGCAAACAACCCAGTTGTGCCTCATGAGTCTCGAGCAAACACAGAGCCTCAAGCATTGGCATCCTCCAACTTTACTGCCGAAACACTTGGTGAAGGCGGGGGAGGACTCGCCGGATCCGTAGTGGCGATGATGGGTAGTGGCGGAGAAGAGGGTTTTTCTGAGGTGGGAGGGAAGTGA | 825 | 44.85 | MFSTNIIFLSLKIENREWFFFFFFQQQQLPNQQPDQASAATTVKRSSRFRGVSRHRWTGRFEAHLWDKFSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGASTFTNFPVSDYEKEIEIMQSVTKEEYLACLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLNPAANNPVVPHESRANTEPQALASSNFTAETLGEGGGGLAGSVVAMMGSGGEEGFSEVGGK* | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 28879550 | 28888389 | + | Vvi14g1487 | Vvi14g1487 | 776554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1487 | 274 | ProSiteProfiles | AP2/ERF domain profile. | 147 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | SMART | rav1_2 | 48 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | SMART | rav1_2 | 147 | 211 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 21 | 240 | - | - | |
Vvi14g1487 | 274 | SUPERFAMILY | DNA-binding domain | 146 | 207 | IPR016177 | GO:0003677 | |
Vvi14g1487 | 274 | CDD | AP2 | 47 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | Pfam | AP2 domain | 47 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | Pfam | AP2 domain | 146 | 197 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | Gene3D | AP2/ERF domain | 47 | 113 | IPR036955 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | Gene3D | AP2/ERF domain | 146 | 207 | IPR036955 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | PRINTS | Ethylene responsive element binding protein signature | 49 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | PRINTS | Ethylene responsive element binding protein signature | 187 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | SUPERFAMILY | DNA-binding domain | 47 | 113 | IPR016177 | GO:0003677 | |
Vvi14g1487 | 274 | CDD | AP2 | 146 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Vvi14g1487 | 274 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 21 | 240 | - | - | |
Vvi14g1487 | 274 | ProSiteProfiles | AP2/ERF domain profile. | 48 | 111 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Vvi1g857 | Vvi14g1487 | ECH |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13975 | PF00847 | AP2 | 2.40E-09 | CL0081 | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1487 | - | - | vvi:100254153 | 434.491 |