Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1487 ATGTTCTCTACAAATATTATATTTCTATCCTTAAAAATAGAAAACAGAGAATGGTTTTTTTTTTTTTTTTTTCAGCAACAGCAGCTGCCAAACCAACAACCTGATCAAGCATCTGCTGCTACCACTGTGAAGAGAAGTTCAAGATTTCGCGGTGTCAGCAGGCATAGATGGACAGGTCGGTTTGAAGCTCACTTGTGGGATAAGTTTTCTTGGAATGTAACACAGAAGAAGAAAGGGAAACAAGGAGCCTATGATGAAGAAGAATCTGCAGCCAGAGCATATGATTTAGCTGCACTCAAGTATTGGGGGGCATCAACTTTCACGAATTTTCCGGTTTCAGATTATGAGAAAGAGATTGAGATAATGCAGTCGGTGACAAAAGAAGAGTACCTAGCCTGTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGGGGTGTGTCTAAGTACAGGGGAGTAGCAAGGCATCATCACAATGGGAGATGGGAAGCAAGGATTGGGAGAGTTTTCGGAAATAAATACCTCTACCTTGGCACATACAGTACACAAGAGGAGGCTGCTCGAGCCTATGATATTGCAGCAATCGAATACAGAGGGATCAATGCTGTGACCAACTTTGATTTGAGCACATATATCAGGTGGCTAAATCCAGCAGCAAACAACCCAGTTGTGCCTCATGAGTCTCGAGCAAACACAGAGCCTCAAGCATTGGCATCCTCCAACTTTACTGCCGAAACACTTGGTGAAGGCGGGGGAGGACTCGCCGGATCCGTAGTGGCGATGATGGGTAGTGGCGGAGAAGAGGGTTTTTCTGAGGTGGGAGGGAAGTGA 825 44.85 MFSTNIIFLSLKIENREWFFFFFFQQQQLPNQQPDQASAATTVKRSSRFRGVSRHRWTGRFEAHLWDKFSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGASTFTNFPVSDYEKEIEIMQSVTKEEYLACLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLNPAANNPVVPHESRANTEPQALASSNFTAETLGEGGGGLAGSVVAMMGSGGEEGFSEVGGK* 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28879550 28888389 + Vvi14g1487 Vvi14g1487 776554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1487 274 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 21 240 - -
Vvi14g1487 274 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
Vvi14g1487 274 CDD AP2 47 113 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 Pfam AP2 domain 47 103 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 Gene3D AP2/ERF domain 47 113 IPR036955 GO:0003700|GO:0006355
Vvi14g1487 274 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Vvi14g1487 274 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
Vvi14g1487 274 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Vvi14g1487 274 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 21 240 - -
Vvi14g1487 274 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g857 Vvi14g1487 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13975 PF00847 AP2 2.40E-09 CL0081 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1487 - - vvi:100254153 434.491