Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1506 | ATGGCTGCTGTGATTCAGCCATGCCCTCTCATCTCCCTGTTTTTTGTCTCCCTTTTTTCTATTCTTCATTTATCTTCTTGTCAACCCAATTCCCCTCGGAATATTGAAACTTTCTATCCGTTCCGGCCTCCTCCAAATCCAACAAATCCAATTCCCAATCCTCGAATTTCCCAACTATCAATTCCATCATCAAAGTCATCGTCAAGCTATGCTGTTGCTAAGGCAGTCGCTGTAACAGCAGCCACCACAATAGTTGTCTCCGGGTTGTTCTTCATTCTGTTCCAAAAGTACACGGTTGCACGGGGGAGAAGCCAGAAAGGTAAAAATGATCCACGAGGTGGAGGTGAAAATGTGGTGAGTCACATTGAGTTCTCACGATTCAATGGAAATCTAAATGGGCTGATTGTCGATGAGAATGGTTTGGACGTGCTTTATTGGAAGAAGCTTGAAGGTGATTACAGGAAGAATAGTTTCCCTAAACAGGCTCTACATAATCTGAAACATGAAGAAAAAAGGATGAGTCGGAATGGAGATGGGAGGGCGAAGTCTGAGCCTATACAAGAAATTCCTTTGCTACGAGGAAAGTCTTCAACTTCCTATGATGAAGTTCAAGAAGAAGTGGAAAATCTGAATTGGTTTTCTGCCCCCCCTCCTTCGTCACAATCTTCTGAGATTTCTCTTGAGGCTGTGGGAAAAACTGAATCAACAATTCAATCATCCACATCTCTCCCACCCCCACCACCTATATTGGCAATTCCACAGAAGCCAAAAGCCTCATCGGTGACCAAAGGGATGCCTAATGGCAGTAAACTAGGAGAGTCTTCATCTGGATATAGCAAGGCAGGGACTGGAAATGGTCGGGTGGCGCTGAAGCCATTGCATTGGGATAAAGTGAACACTAACGCCGATCATTCAATGGTGTGGCACAAAATTAATGGCGGTTCTTTCAGCTTCGATGGTGACCTCATGGATGCACTGTTTGGAAATGTTGCTGCTAATGGGAGATCTCCTCAGATAAACCATAACAACCCAAATGGTGCCAGCTCAATTCAATCGGCTCAGATTTTCATCCTTGATAGTCGAAAGTCCCAAAACACAGCAATTGTACTCCGATCTTTAGCAATCTCGCGAAAAGAGATCCTCAACGCACTCATTAAGGGCCAAGACCTGAATGCAGATGCTCTTGAAAAGCTTACAAAAATTGCCCCAACTAAAGAAGAAGAATCCCAAATCCTTGCATTCGAGGGAGACCCCACAAGACTGGCTGATGCTGAATCCTTCCTCTACCATATCCTAAAAGCTGTTCCATCAGCATTCATACGTCTTAGTGCCATGTTTTTCAGATCGAATTATGACTCAGAGATTCTCCATCTCAGGGAATGTTTACAAACACTTGAATTGGGTTGCAAAGAGCTTCGAACTCGTGGACTTTTCTTAAAACTTTTGGAAGCCATACTCGAGGCAGGCAATCGCATGAATGCTGGAACTTCCAGAGGGAATGCCCAAGCTTTTAACCTCGCTGCTCTTCAAAAGCTTTCTGATGTTAAAAGCACTGATGGAAAAACTACGTTACTTCACTTTGTTGTGGAAGAAGTAGTCCGTTCTGAGGGCAAACGTTGTGTTTTGAACCGAAATCGCAGCTTGAGTCACAGCAGCAACAGTAGCCTGTATTCTGAGAACTCGGCATCAAGAGAGGATAGAGAAAAGGAATACATAATGATTGGTTTACCAGTGGTAGGAAGCCTAAGTGCTGAATTCTCTAATGTAAAGAAAGTAGCTGAAATGGACTACAATGCCTTTGGTGGCGTATGTTCAACTCTCACAGCCCATTCCACTGAAATCAAGCAATTTGTGGCACCATTTGCCAACAGTGATGGAGGATTTTTGAGGAAGATGAAAAGTTTTCTCGAAGCAGCAGGCGAAGAATTAAGGGAGGTGAGAGAAGAGCAAACAAGGGTAATGGAGCTCTTAAGGAGAACAACAGAATATTATCAACCACGATCTTCAAAGAACAAAGAGGCAAGCCCGCTTCAATTATTTATTATAGTAAAAGATTTTCTGGGTATGGTTGATCAGGTCTGTGTTGATATTGCTCGAAATCTACAACGGAGGAAAACAACCACAGCAAGTTTGGGGCCATCATCAACAAAGTCACCACCATCAAGAATTCCAGTGAAGTTCCCAAACTTGCCGCCAAATTTCATGCCAGACAAGTCCAGGAACTCTTCTTCTAGTGATTCAGAAGATGAGTTCTGA | 2256 | 43.44 | MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLSIPSSKSSSSYAVAKAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGKNDPRGGGENVVSHIEFSRFNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALHNLKHEEKRMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQSSEISLEAVGKTESTIQSSTSLPPPPPILAIPQKPKASSVTKGMPNGSKLGESSSGYSKAGTGNGRVALKPLHWDKVNTNADHSMVWHKINGGSFSFDGDLMDALFGNVAANGRSPQINHNNPNGASSIQSAQIFILDSRKSQNTAIVLRSLAISRKEILNALIKGQDLNADALEKLTKIAPTKEEESQILAFEGDPTRLADAESFLYHILKAVPSAFIRLSAMFFRSNYDSEILHLRECLQTLELGCKELRTRGLFLKLLEAILEAGNRMNAGTSRGNAQAFNLAALQKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVLNRNRSLSHSSNSSLYSENSASREDREKEYIMIGLPVVGSLSAEFSNVKKVAEMDYNAFGGVCSTLTAHSTEIKQFVAPFANSDGGFLRKMKSFLEAAGEELREVREEQTRVMELLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARNLQRRKTTTASLGPSSTKSPPSRIPVKFPNLPPNFMPDKSRNSSSSDSEDEF* | 752 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 29069038 | 29071592 | - | Vvi14g1506 | Vvi14g1506 | 776573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1506 | 751 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 280 | 716 | IPR015425 | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 706 | 751 | - | - | |
Vvi14g1506 | 751 | PANTHER | FORMIN-RELATED | 236 | 746 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Vvi14g1506 | 751 | PANTHER | FORMIN-RELATED | 6 | 258 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Vvi14g1506 | 751 | SMART | it6_source | 280 | 705 | IPR015425 | - | |
Vvi14g1506 | 751 | Coils | Coil | 629 | 649 | - | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 260 | 282 | - | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 171 | 197 | - | - | |
Vvi14g1506 | 751 | Gene3D | Formin, FH2 domain | 289 | 711 | IPR042201 | - | |
Vvi14g1506 | 751 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 293 | 705 | - | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 39 | 58 | - | - | |
Vvi14g1506 | 751 | Pfam | Formin Homology 2 Domain | 288 | 690 | IPR015425 | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 252 | 283 | - | - | |
Vvi14g1506 | 751 | PANTHER | FORMIN-LIKE PROTEIN 4 | 6 | 258 | - | - | |
Vvi14g1506 | 751 | PANTHER | FORMIN-LIKE PROTEIN 4 | 236 | 746 | - | - | |
Vvi14g1506 | 751 | MobiDBLite | consensus disorder prediction | 706 | 722 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Vvi1g795 | Vvi14g1506 | ECH | |
Vvi14g1506 | Vvi17g677 | ECH |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1506 | - | - | vvi:104879926 | 1149.42 |