Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1506 ATGGCTGCTGTGATTCAGCCATGCCCTCTCATCTCCCTGTTTTTTGTCTCCCTTTTTTCTATTCTTCATTTATCTTCTTGTCAACCCAATTCCCCTCGGAATATTGAAACTTTCTATCCGTTCCGGCCTCCTCCAAATCCAACAAATCCAATTCCCAATCCTCGAATTTCCCAACTATCAATTCCATCATCAAAGTCATCGTCAAGCTATGCTGTTGCTAAGGCAGTCGCTGTAACAGCAGCCACCACAATAGTTGTCTCCGGGTTGTTCTTCATTCTGTTCCAAAAGTACACGGTTGCACGGGGGAGAAGCCAGAAAGGTAAAAATGATCCACGAGGTGGAGGTGAAAATGTGGTGAGTCACATTGAGTTCTCACGATTCAATGGAAATCTAAATGGGCTGATTGTCGATGAGAATGGTTTGGACGTGCTTTATTGGAAGAAGCTTGAAGGTGATTACAGGAAGAATAGTTTCCCTAAACAGGCTCTACATAATCTGAAACATGAAGAAAAAAGGATGAGTCGGAATGGAGATGGGAGGGCGAAGTCTGAGCCTATACAAGAAATTCCTTTGCTACGAGGAAAGTCTTCAACTTCCTATGATGAAGTTCAAGAAGAAGTGGAAAATCTGAATTGGTTTTCTGCCCCCCCTCCTTCGTCACAATCTTCTGAGATTTCTCTTGAGGCTGTGGGAAAAACTGAATCAACAATTCAATCATCCACATCTCTCCCACCCCCACCACCTATATTGGCAATTCCACAGAAGCCAAAAGCCTCATCGGTGACCAAAGGGATGCCTAATGGCAGTAAACTAGGAGAGTCTTCATCTGGATATAGCAAGGCAGGGACTGGAAATGGTCGGGTGGCGCTGAAGCCATTGCATTGGGATAAAGTGAACACTAACGCCGATCATTCAATGGTGTGGCACAAAATTAATGGCGGTTCTTTCAGCTTCGATGGTGACCTCATGGATGCACTGTTTGGAAATGTTGCTGCTAATGGGAGATCTCCTCAGATAAACCATAACAACCCAAATGGTGCCAGCTCAATTCAATCGGCTCAGATTTTCATCCTTGATAGTCGAAAGTCCCAAAACACAGCAATTGTACTCCGATCTTTAGCAATCTCGCGAAAAGAGATCCTCAACGCACTCATTAAGGGCCAAGACCTGAATGCAGATGCTCTTGAAAAGCTTACAAAAATTGCCCCAACTAAAGAAGAAGAATCCCAAATCCTTGCATTCGAGGGAGACCCCACAAGACTGGCTGATGCTGAATCCTTCCTCTACCATATCCTAAAAGCTGTTCCATCAGCATTCATACGTCTTAGTGCCATGTTTTTCAGATCGAATTATGACTCAGAGATTCTCCATCTCAGGGAATGTTTACAAACACTTGAATTGGGTTGCAAAGAGCTTCGAACTCGTGGACTTTTCTTAAAACTTTTGGAAGCCATACTCGAGGCAGGCAATCGCATGAATGCTGGAACTTCCAGAGGGAATGCCCAAGCTTTTAACCTCGCTGCTCTTCAAAAGCTTTCTGATGTTAAAAGCACTGATGGAAAAACTACGTTACTTCACTTTGTTGTGGAAGAAGTAGTCCGTTCTGAGGGCAAACGTTGTGTTTTGAACCGAAATCGCAGCTTGAGTCACAGCAGCAACAGTAGCCTGTATTCTGAGAACTCGGCATCAAGAGAGGATAGAGAAAAGGAATACATAATGATTGGTTTACCAGTGGTAGGAAGCCTAAGTGCTGAATTCTCTAATGTAAAGAAAGTAGCTGAAATGGACTACAATGCCTTTGGTGGCGTATGTTCAACTCTCACAGCCCATTCCACTGAAATCAAGCAATTTGTGGCACCATTTGCCAACAGTGATGGAGGATTTTTGAGGAAGATGAAAAGTTTTCTCGAAGCAGCAGGCGAAGAATTAAGGGAGGTGAGAGAAGAGCAAACAAGGGTAATGGAGCTCTTAAGGAGAACAACAGAATATTATCAACCACGATCTTCAAAGAACAAAGAGGCAAGCCCGCTTCAATTATTTATTATAGTAAAAGATTTTCTGGGTATGGTTGATCAGGTCTGTGTTGATATTGCTCGAAATCTACAACGGAGGAAAACAACCACAGCAAGTTTGGGGCCATCATCAACAAAGTCACCACCATCAAGAATTCCAGTGAAGTTCCCAAACTTGCCGCCAAATTTCATGCCAGACAAGTCCAGGAACTCTTCTTCTAGTGATTCAGAAGATGAGTTCTGA 2256 43.44 MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLSIPSSKSSSSYAVAKAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGKNDPRGGGENVVSHIEFSRFNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALHNLKHEEKRMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQSSEISLEAVGKTESTIQSSTSLPPPPPILAIPQKPKASSVTKGMPNGSKLGESSSGYSKAGTGNGRVALKPLHWDKVNTNADHSMVWHKINGGSFSFDGDLMDALFGNVAANGRSPQINHNNPNGASSIQSAQIFILDSRKSQNTAIVLRSLAISRKEILNALIKGQDLNADALEKLTKIAPTKEEESQILAFEGDPTRLADAESFLYHILKAVPSAFIRLSAMFFRSNYDSEILHLRECLQTLELGCKELRTRGLFLKLLEAILEAGNRMNAGTSRGNAQAFNLAALQKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVLNRNRSLSHSSNSSLYSENSASREDREKEYIMIGLPVVGSLSAEFSNVKKVAEMDYNAFGGVCSTLTAHSTEIKQFVAPFANSDGGFLRKMKSFLEAAGEELREVREEQTRVMELLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARNLQRRKTTTASLGPSSTKSPPSRIPVKFPNLPPNFMPDKSRNSSSSDSEDEF* 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 29069038 29071592 - Vvi14g1506 Vvi14g1506 776573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1506 751 ProSiteProfiles Formin homology-2 (FH2) domain profile. 280 716 IPR015425 -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 706 751 - -
Vvi14g1506 751 PANTHER FORMIN-RELATED 236 746 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi14g1506 751 PANTHER FORMIN-RELATED 6 258 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi14g1506 751 SMART it6_source 280 705 IPR015425 -
Vvi14g1506 751 Coils Coil 629 649 - -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 260 282 - -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 171 197 - -
Vvi14g1506 751 Gene3D Formin, FH2 domain 289 711 IPR042201 -
Vvi14g1506 751 SUPERFAMILY Formin homology 2 domain (FH2 domain) 293 705 - -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 39 58 - -
Vvi14g1506 751 Pfam Formin Homology 2 Domain 288 690 IPR015425 -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 252 283 - -
Vvi14g1506 751 PANTHER FORMIN-LIKE PROTEIN 4 6 258 - -
Vvi14g1506 751 PANTHER FORMIN-LIKE PROTEIN 4 236 746 - -
Vvi14g1506 751 MobiDBLite consensus disorder prediction 706 722 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g795 Vvi14g1506 ECH
Vvi14g1506 Vvi17g677 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1506 - - vvi:104879926 1149.42