Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1585 ATGGGCTGCCTTGGGGAAATGGATGGACCAACTGGGCGGGGTGGTGGTGGTGTGGATATGTTCTTATCAAACTATAAGCTGGGGAAAACCCTTGGCATTGGTTCATTTGGTAAGGTTAAAATTGCAGAACATGCATTAACTGGACACAAAGTTGCTATCAAGATCCTTAACCGTCGGAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATATTGAGATTGTTCATGCACCCTCACATCATTCGACTTTATGAGGTTATAGAGACACCCAGTGATATTTTTGTCGTGATGGAGTATGTGAAGTCTGGAGAGCTTTTTGATTACATTGTAGAGAAGGGCAGGCTACAGGAGGAAGAAGCTCGTAACTTTTTTCAACAGATAATTTCTGGCGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTTAAACCTGAGAACTTGCTTTTGGATTCCAAATGCAATGTGAAGATTGCTGATTTTGGTTTAAGTAATATCATGAGAGATGGTCATTTTTTGAAGACAAGTTGTGGAAGCCCAAATTATGCTGCCCCAGAGGTTATATCTGGAAGATTGTACGCAGGACCTGAGGTGGATGTATGGAGCTGCGGTGTTATTTTGTACGCTCTTCTTTGTGGTACTCTTCCATTTGATGATGAAAACATTCCCAACCTTTTCAAGAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATTTATCAACTGGTGCTAGAGATCTGATCCCAAGGATGCTCATAGTTGACCCTATGAAGCGAATGACAATTCCTGAGATTCGTCAGCACCCATGGTTCCAAGCTCATCTTCCTCGCTATTTGGCTGTACCCCCACCTGACACAATTCAACAAGCAAAAAAGATTGATGAGGAGATTCTTCAGGAAGTGGTTAAGATGGGATTTGACAGGAATCTACTTGTTGAATCTCTTCGCAACAGAGTACAAAATGATGCTACCGTTGCATACTATTTGCTATTGGACAACCGTTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAGGAATCTTTGGAATATCAATTCAATCGTAGTGAAGCTGGAGCTGTTGGGCAGCGGTTTCCAGGATATGTGGATTATCAAGGAATGGGTTTAAGAACCCAGTTCCCAGCTGAGAGGAAATGGGCTCTTGGGCTTCAGTCTCGAGCCCAGCCTAGACAGATAATGACTGAAGTTCTCAAAGCTCTACAAGAACTGAATGTGTGTTGGAAAAAGATTGGGCATTACAACATGAAATGCAGGTGGATTCCAGGCATTCCTGGGCATCATGAAGGCATGGTTAACAATCCTGTGCACAGTAATCATTTCTTTGGGGATGAACCAGCAATTGTTGAGAATGATGGTGTTTCCAGGAATGTGGTCAAGTTTGAAGTGCAGCTTTACAAAACTCGAGAGGAGAAGTATCTGCTTGATCTGCAGAGAGTTCAGGGCCCACAATTCCTCTTCTTGGATCTTTGTGCAGCTTTCCTTGCTCAGCTCCGGGTCCTCTAA 1545 42.91 MGCLGEMDGPTGRGGGGVDMFLSNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIFVVMEYVKSGELFDYIVEKGRLQEEEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGRLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSTGARDLIPRMLIVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTIQQAKKIDEEILQEVVKMGFDRNLLVESLRNRVQNDATVAYYLLLDNRFRVSSGYLGAEFQESLEYQFNRSEAGAVGQRFPGYVDYQGMGLRTQFPAERKWALGLQSRAQPRQIMTEVLKALQELNVCWKKIGHYNMKCRWIPGIPGHHEGMVNNPVHSNHFFGDEPAIVENDGVSRNVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL* 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 29856616 29867241 - Vvi14g1585 Vvi14g1585 776652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1585 514 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Vvi14g1585 514 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 465 513 IPR001772 -
Vvi14g1585 514 Pfam Protein kinase domain 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1585 514 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 298 338 IPR015940 -
Vvi14g1585 514 ProSiteProfiles Protein kinase domain profile. 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1585 514 Gene3D Transferase(Phosphotransferase) domain 1 17 355 - -
Vvi14g1585 514 PANTHER SERINE/THREONINE KINASE 14 513 - -
Vvi14g1585 514 CDD AMPKA_C 390 511 - -
Vvi14g1585 514 Gene3D Kinase associated domain 1, KA1 396 512 - -
Vvi14g1585 514 SUPERFAMILY KA1-like 334 513 IPR028375 -
Vvi14g1585 514 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 513 - -
Vvi14g1585 514 SUPERFAMILY Protein kinase-like (PK-like) 21 293 IPR011009 -
Vvi14g1585 514 CDD STKc_AMPK_alpha 22 277 - -
Vvi14g1585 514 CDD UBA_SnRK1_plant 299 339 - -
Vvi14g1585 514 SMART serkin_6 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1585 514 SUPERFAMILY UBA-like 298 341 IPR009060 GO:0005515
Vvi14g1585 514 SMART uba_6 300 337 IPR015940 -
Vvi14g1585 514 Pfam Kinase associated domain 1 471 513 IPR001772 -
Vvi14g1585 514 Pfam UBA/TS-N domain 299 335 IPR015940 -
Vvi14g1585 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76212 PF00069 Pkinase 6.10E-80 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1585 K07198 - vvi:100254223 1021.54