Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1585 | ATGGGCTGCCTTGGGGAAATGGATGGACCAACTGGGCGGGGTGGTGGTGGTGTGGATATGTTCTTATCAAACTATAAGCTGGGGAAAACCCTTGGCATTGGTTCATTTGGTAAGGTTAAAATTGCAGAACATGCATTAACTGGACACAAAGTTGCTATCAAGATCCTTAACCGTCGGAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATATTGAGATTGTTCATGCACCCTCACATCATTCGACTTTATGAGGTTATAGAGACACCCAGTGATATTTTTGTCGTGATGGAGTATGTGAAGTCTGGAGAGCTTTTTGATTACATTGTAGAGAAGGGCAGGCTACAGGAGGAAGAAGCTCGTAACTTTTTTCAACAGATAATTTCTGGCGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTTAAACCTGAGAACTTGCTTTTGGATTCCAAATGCAATGTGAAGATTGCTGATTTTGGTTTAAGTAATATCATGAGAGATGGTCATTTTTTGAAGACAAGTTGTGGAAGCCCAAATTATGCTGCCCCAGAGGTTATATCTGGAAGATTGTACGCAGGACCTGAGGTGGATGTATGGAGCTGCGGTGTTATTTTGTACGCTCTTCTTTGTGGTACTCTTCCATTTGATGATGAAAACATTCCCAACCTTTTCAAGAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATTTATCAACTGGTGCTAGAGATCTGATCCCAAGGATGCTCATAGTTGACCCTATGAAGCGAATGACAATTCCTGAGATTCGTCAGCACCCATGGTTCCAAGCTCATCTTCCTCGCTATTTGGCTGTACCCCCACCTGACACAATTCAACAAGCAAAAAAGATTGATGAGGAGATTCTTCAGGAAGTGGTTAAGATGGGATTTGACAGGAATCTACTTGTTGAATCTCTTCGCAACAGAGTACAAAATGATGCTACCGTTGCATACTATTTGCTATTGGACAACCGTTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAGGAATCTTTGGAATATCAATTCAATCGTAGTGAAGCTGGAGCTGTTGGGCAGCGGTTTCCAGGATATGTGGATTATCAAGGAATGGGTTTAAGAACCCAGTTCCCAGCTGAGAGGAAATGGGCTCTTGGGCTTCAGTCTCGAGCCCAGCCTAGACAGATAATGACTGAAGTTCTCAAAGCTCTACAAGAACTGAATGTGTGTTGGAAAAAGATTGGGCATTACAACATGAAATGCAGGTGGATTCCAGGCATTCCTGGGCATCATGAAGGCATGGTTAACAATCCTGTGCACAGTAATCATTTCTTTGGGGATGAACCAGCAATTGTTGAGAATGATGGTGTTTCCAGGAATGTGGTCAAGTTTGAAGTGCAGCTTTACAAAACTCGAGAGGAGAAGTATCTGCTTGATCTGCAGAGAGTTCAGGGCCCACAATTCCTCTTCTTGGATCTTTGTGCAGCTTTCCTTGCTCAGCTCCGGGTCCTCTAA | 1545 | 42.91 | MGCLGEMDGPTGRGGGGVDMFLSNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIFVVMEYVKSGELFDYIVEKGRLQEEEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGRLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSTGARDLIPRMLIVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTIQQAKKIDEEILQEVVKMGFDRNLLVESLRNRVQNDATVAYYLLLDNRFRVSSGYLGAEFQESLEYQFNRSEAGAVGQRFPGYVDYQGMGLRTQFPAERKWALGLQSRAQPRQIMTEVLKALQELNVCWKKIGHYNMKCRWIPGIPGHHEGMVNNPVHSNHFFGDEPAIVENDGVSRNVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL* | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 29856616 | 29867241 | - | Vvi14g1585 | Vvi14g1585 | 776652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1585 | 514 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Vvi14g1585 | 514 | ProSiteProfiles | Kinase associated domain 1 (KA1) profile. | 465 | 513 | IPR001772 | - | |
Vvi14g1585 | 514 | Pfam | Protein kinase domain | 25 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1585 | 514 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 298 | 338 | IPR015940 | - | |
Vvi14g1585 | 514 | ProSiteProfiles | Protein kinase domain profile. | 25 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1585 | 514 | Gene3D | Transferase(Phosphotransferase) domain 1 | 17 | 355 | - | - | |
Vvi14g1585 | 514 | PANTHER | SERINE/THREONINE KINASE | 14 | 513 | - | - | |
Vvi14g1585 | 514 | CDD | AMPKA_C | 390 | 511 | - | - | |
Vvi14g1585 | 514 | Gene3D | Kinase associated domain 1, KA1 | 396 | 512 | - | - | |
Vvi14g1585 | 514 | SUPERFAMILY | KA1-like | 334 | 513 | IPR028375 | - | |
Vvi14g1585 | 514 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 14 | 513 | - | - | |
Vvi14g1585 | 514 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 293 | IPR011009 | - | |
Vvi14g1585 | 514 | CDD | STKc_AMPK_alpha | 22 | 277 | - | - | |
Vvi14g1585 | 514 | CDD | UBA_SnRK1_plant | 299 | 339 | - | - | |
Vvi14g1585 | 514 | SMART | serkin_6 | 25 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1585 | 514 | SUPERFAMILY | UBA-like | 298 | 341 | IPR009060 | GO:0005515 | |
Vvi14g1585 | 514 | SMART | uba_6 | 300 | 337 | IPR015940 | - | |
Vvi14g1585 | 514 | Pfam | Kinase associated domain 1 | 471 | 513 | IPR001772 | - | |
Vvi14g1585 | 514 | Pfam | UBA/TS-N domain | 299 | 335 | IPR015940 | - | |
Vvi14g1585 | 514 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672|GO:0006468 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76212 | PF00069 | Pkinase | 6.10E-80 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1585 | K07198 | - | vvi:100254223 | 1021.54 |