Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1593 ATGTGCGCCGTGGTGCTGATGTTGCCGGACGTGTCGGCCACGCGGTGGACCGTCGGAGGGAACCAGGGCTGGAGCACCAACGTCAACTACACGGTCTGGGCCAAGGACAAGCACTTCTACAATGGCGACTGGCTCTTTTTTGTGTATGATAGGAACCAGATGAATGTGTTGGAGGTAAATGAGACAAACTATGAGTCATGCAATTCCGATCATCCGCTTCACAATTGGACTACAGGTGCTGGAAGGGATGTTGTTCCTCTTAACGTCACCCGGAAATATTATTTCCTCAGTGGCAAGGGGTTCTGCTATAGTGGAATGAAGATAGCTATCAATGTTGAAAACCCACCGCCCCCTCCCTCAGCTTCACCAATAAAAGAATCGAACGACTCTCCAAGTTCTAATTACAGAGGCCAGATTGTTGTACCAGCCGTTTTTGCCATTGCCGCAGTGTGGGACTCATTCCTCCGTCTCTACTGGTAA 480 50.0 MCAVVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFLRLYW* 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 29934780 29936781 - Vvi14g1593 Vvi14g1593 776660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1593 159 Gene3D - 12 115 IPR008972 -
Vvi14g1593 159 PANTHER BLUE COPPER PROTEIN 1 150 IPR039391 GO:0009055
Vvi14g1593 159 ProSiteProfiles Phytocyanin domain profile. 14 114 IPR003245 GO:0009055
Vvi14g1593 159 SUPERFAMILY Cupredoxins 13 112 IPR008972 -
Vvi14g1593 159 Pfam Plastocyanin-like domain 24 106 IPR003245 GO:0009055
Vvi14g1593 159 PANTHER LAMIN-LIKE PROTEIN 1 150 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1593 - - vvi:100243953 332.028