Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi14g1601 | ATGGTTTCAGAACTGCAAGAGGTTACTGGTCAACTATACCGGCCATCCCTGGAAGTTGCTAGGAGTTGCTGCAGACAAATCAAGAAAGGATATCAGAGAACGAACAGCCCTCGTTACTATCTCTCCTTTGGCAACAATGATCAACAAGGGACGAAATCAGAGCAAGGTGAACGCTGTGTTGTAGTTCAAATGGACACAGAGAGCCCCGTACTCTACCAGAAGGCCTGCCTGGATTACAATTTTGACAAACCACTAAAAGTCACTGGAGATGTGCACATAATCTTCTACCAAAAGTCGATGGGAGGCCGTCTGTTCTATACGTGCTTCAACACTGCTTTCATTAGGAACAGCTTGCTGCAGTTCACTGTAAGTAATTTGGATAAAATGGGGCACAAGGGGAAATCGATATGTGGTCCTGCCTTTGGTTTGGAGTTGCTGTTTGGGCCTGCTAATGCAGAGCACTCATTTCAGCCTACATTGGATGATGATGATTTGCTTTAA | 501 | 45.11 | MVSELQEVTGQLYRPSLEVARSCCRQIKKGYQRTNSPRYYLSFGNNDQQGTKSEQGERCVVVQMDTESPVLYQKACLDYNFDKPLKVTGDVHIIFYQKSMGGRLFYTCFNTAFIRNSLLQFTVSNLDKMGHKGKSICGPAFGLELLFGPANAEHSFQPTLDDDDLL* | 167 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 29984789 | 29985875 | - | Vvi14g1601 | Vvi14g1601 | 776668 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi14g1601 | 166 | Pfam | C2 domain of PTEN tumour-suppressor protein | 63 | 147 | IPR014020 | - | |
| Vvi14g1601 | 166 | SMART | PTEN_C2_2 | 13 | 149 | IPR014020 | - | |
| Vvi14g1601 | 166 | ProSiteProfiles | C2 tensin-type domain profile. | 1 | 150 | IPR014020 | - | |
| Vvi14g1601 | 166 | PANTHER | BNAC03G16750D PROTEIN | 2 | 155 | - | - | |
| Vvi14g1601 | 166 | Gene3D | - | 16 | 152 | - | - | |
| Vvi14g1601 | 166 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 2 | 155 | - | - | |
| Vvi14g1601 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 74 | 149 | IPR035892 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi14g1601 | K01110 | - | vvi:100254134 | 345.125 |