Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g17 ATGGTAGGCTTAACCCTTATTCACGCTGCTGCTGCGAAAGGGGCAGTTTGTTTAGATGGAACATTACCGGGGTATCATTTGCATCGTGGATATGGGTCAGGGGCAAACAGTTGGCTCATTCAATTGGAGGGGGGAGGATGGTGTAATAGCATTAGAACTTGTGTTTACCGCAAGAAAACTAGGAGAGGATCATCAATATATATGGAAAAGCAGATCCCATTTACCGGAATTCTGAGCAATAATCCTGAAGAAAATCCTGATTTTTTCAACTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCTTTTACTGGTGACAGCCAAAATCAGGCTGCACAACTGAATTTCAGAGGACAGCGTATCTGGTCAGCTGCTATAGAAGATTTAATGTCCAAGGGAATGCGCTATGCCAACCAGGCTCTTCTTTCTGGGTGCTCTGCTGGAGGTCTGGCAGCTATTTTGCACTGTGATGAGTTTCGAGGCTTTTTTCCAAGAAATACTAAAGTGAAGTGCCTGAGTGATGCTGGATTATTCCTTGATTCGATTGATGTATCCGGTGGGCGCACCCTTAGGAATCTCTTCAGTGGTGTAGTTAACTTGCAGGGGGTGCAAAGGAACCTGCCATCTTTTTGTTTGAATCGTCTTGATCCAACCTCGTGCTTCTTCCCACAGAACGTGATATCCAATATCAAAACCCCGCTATTTCTTCTCAATGCAGCCTATGATTCATGGCAGGTCCAGGCCAGTTTAGCTCCACCATCAGCTGATCCCCATGGCTATTGGAATGAATGCAAAAAGAACCATGCCCAGTGTTCTCCATCACAAATTCAATTCCTGCAAGGATTCAGGAATCAAATGCTGAATGCAATAAAAGGCTTCTCAATGTCTAAACAAAACGGGTTATTCATAAATTCATGTTTTGCTCACTGCCAGACAGAGAGGCAGGATACGTGGTTTGCTGATAATTCTCCCATTATTAAAAACAAGGGGATTGCTTTAGCTGTTGGAGACTGGTACTTCGACCGATCTGGCATTAAAGCCATCGACTGCCCCTACCCTTGTGACAAGACCTGCCACAATCTAGTATTCCGATGA 1098 44.35 MVGLTLIHAAAAKGAVCLDGTLPGYHLHRGYGSGANSWLIQLEGGGWCNSIRTCVYRKKTRRGSSIYMEKQIPFTGILSNNPEENPDFFNWNRVKLRYCDGASFTGDSQNQAAQLNFRGQRIWSAAIEDLMSKGMRYANQALLSGCSAGGLAAILHCDEFRGFFPRNTKVKCLSDAGLFLDSIDVSGGRTLRNLFSGVVNLQGVQRNLPSFCLNRLDPTSCFFPQNVISNIKTPLFLLNAAYDSWQVQASLAPPSADPHGYWNECKKNHAQCSPSQIQFLQGFRNQMLNAIKGFSMSKQNGLFINSCFAHCQTERQDTWFADNSPIIKNKGIALAVGDWYFDRSGIKAIDCPYPCDKTCHNLVFR* 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 230322 237872 + Vvi14g17 Vvi14g17 775084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g17 365 PANTHER PECTIN ACETYLESTERASE 2 1 364 - -
Vvi14g17 365 PANTHER NOTUM-RELATED 1 364 IPR004963 GO:0016787
Vvi14g17 365 Pfam Pectinacetylesterase 1 344 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g286 Vvi14g17 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g17 K19882 - vvi:100264849 770.385