Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g193 ATGGAACAGCAAGCAAGGAACTCAGACTCTTCTTCAGGATCAAACCAAACCCCACAAAGGGACTTGCAGCCTCCATCTCATAAACCTCCCAATCCTCCACCACCTCCAGGAGGCATCCCTCCGCCGCCTTGCCCGCCTCCATTTCTGAGAGTAAATAGTAATTCCCTCAAAACCCCGCCGCCTCCTCCATCTCAACTCTCTCAATTTATCCCTCTGGGAAAAGATGGAGCTCCCCTGCCAAAGTTGAAGCCATTGCACTGGGACAAAGTCAGAGCTGCGCCAAACCGTTCCACAGTGTGGGACAAGCTGAGATCGAGTTCATTCGAACTGGATGAGAAAATGATCGAATCACTTTTCGGGTACAATCTGCAAACTACAATGAAGAATGATGAGGCAAAGAGCAAGAGCCCTTCTCCAAGCAAGCATGTTCTTGAGCCCAAGAGACTACAGAATATAACCATACTCTCAAAAGCCTTGAATGCCACTGCTGTACAAGTATGTGATGCATTACAACAAGGGGACGGTCTGTGCTTACAACAACTAGAGGCATTGGCCAAGATGGTGCCCACTGATGAAGAGGAGGCTAAGCTCTCAAGCTACAATGGAGACATCAATGAACTGGGCTCAGCAGAGAGGTTTGTTAAGGCAATGCTGGATATCCCATTTGCCTTTCTGAGGATTGAAGCCATGCTCTACAAAGAAACATTTGAAGATGAAGTGGTTCATCTCAGAAAGTCCTTCTCAATGTTAGAGGAGGCCTGCAAGGAGCTGAGGTCAAGCAGGCTCTTCCTGAAACTGCTTGAAGCTGTGCTGAAAACCGGGAACAGGATGAATGTAGGGACAATCAGAGGAGGGGCAAGAGCATTCAAGCTGGACGCCCTTCTTAAGCTTTCTGATGTGAAAGGAACAGATGGAAAAACCACCTTACTCCACTTTGTGGTCCAAGAAATGATCCGGACAGAAGGAATCAAAGCTTCAGAGAGCATCATAGGGAAGATCAATCTGAAAACAAAGAACAAGACTAAGACAGCCACAGTGGACATGGATGTTCTTGCAAGCTCAGTCTCAAACCTCTCGGATGGAAAGAGAAAGCTGCAGAATCTGGTAAACAATGACTTGGGTAATGACCAGAGAAGCAGAAACTTTGTGGGTTCCATGAAATCATTTCTGGGTCATGCAGAAAAGAATCTGAAGGAGTTGCAGGAAGATGAAAATAGAGTCCTGTTACAAGTTAGAGAAATCACAGAGTATTTCCATGGAGATGTGAGCAAGGATGAAGCTAATCCACTTAGGATTTTTGTGATTGTCAGAGACTTTCTGGGTATGCTGGACCATATCTGTAAAGAGCTTAGAAGCGCCAAAATCCCAAGATCTCCAAATCCTCTGTCCCCATTCAGATAG 1401 46.11 MEQQARNSDSSSGSNQTPQRDLQPPSHKPPNPPPPPGGIPPPPCPPPFLRVNSNSLKTPPPPPSQLSQFIPLGKDGAPLPKLKPLHWDKVRAAPNRSTVWDKLRSSSFELDEKMIESLFGYNLQTTMKNDEAKSKSPSPSKHVLEPKRLQNITILSKALNATAVQVCDALQQGDGLCLQQLEALAKMVPTDEEEAKLSSYNGDINELGSAERFVKAMLDIPFAFLRIEAMLYKETFEDEVVHLRKSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLSDVKGTDGKTTLLHFVVQEMIRTEGIKASESIIGKINLKTKNKTKTATVDMDVLASSVSNLSDGKRKLQNLVNNDLGNDQRSRNFVGSMKSFLGHAEKNLKELQEDENRVLLQVREITEYFHGDVSKDEANPLRIFVIVRDFLGMLDHICKELRSAKIPRSPNPLSPFR* 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1915896 1918892 + Vvi14g193 Vvi14g193 775260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g193 466 PANTHER FORMIN-RELATED 23 454 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi14g193 466 SMART it6_source 72 458 IPR015425 -
Vvi14g193 466 Gene3D Formin, FH2 domain 71 454 IPR042201 -
Vvi14g193 466 PANTHER FORMIN-LIKE PROTEIN 11 23 454 - -
Vvi14g193 466 ProSiteProfiles Formin homology-2 (FH2) domain profile. 72 466 IPR015425 -
Vvi14g193 466 Pfam Formin Homology 2 Domain 76 443 IPR015425 -
Vvi14g193 466 SUPERFAMILY Formin homology 2 domain (FH2 domain) 85 452 - -
Vvi14g193 466 MobiDBLite consensus disorder prediction 23 49 - -
Vvi14g193 466 Coils Coil 390 410 - -
Vvi14g193 466 MobiDBLite consensus disorder prediction 1 22 - -
Vvi14g193 466 MobiDBLite consensus disorder prediction 1 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g193 - - vvi:100240767 821.231