Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g219 ATGGCCGATTTCCAAACCTCCACTCACCGATCTAAGTGGATCTTCACTCCTCAAGACCTGATTGAAAAGTACAAAGCTGCCAATCAGAGAGCAAAACAAACATTGGAGAAGTATGGAGTAACACGCATTGAAGTAGATGCTGATGGGTCATTGCAATACCCTGAACCTCAAATTAGTGCAAAAGACAATGCTGAAAAGCGTTCTCGACCCAAACCACTTAATTTTGAAGAAGAACGATTTATGCGGTCATTCTATGAGTATAAGATTCAAGAAGTATGTGCAGCCTTCTCTTTCCCTCACAAAATTCAGGCAACAGCTCTCATATACTACAAAAGGTTTTATCTGCAGTGGTCGGTCATGGAACATCACCCAAAACACATAATGTTAACCTGCATATATGCAGCTTGTAAGATAGAAGAAAACCATGTATCAGCGGAGGAGCTCGGTAAGGGGATTGCACAAGATCACCAAATGATTCTCAATAATGAGATGATAGTTCTTCAGAGTCTAGATTTTGATCTTATTGTTTTTGCACCATATCGTTCAGTTGAAGGTTTTGTTGATGACATGGAGGAGTTCTGCCAAGCAAAAAATGACCGGCTTCAAATGTTGAAGGATTTGCACAAAACTGCAAAGATGGAAGTAGACAAGACCATGCTCACAGATGCGCCACTTCTATTCCCTCCTGGCCAGTTGGCATTGGCTGCTTTGCGGAGGTCAAATGAGGTGCACCAAGTTCTTGACTTCGAGAGATATCTGAGCAGCATCCTCTCTCGACAGGATTTTTCACACGCCTTCTCAGAGCTCACTGAATCTCTAAACGCAATAGATTCTTGGGTAATGAAACATCAAGTCCCTACCACTGAAGACATGAAGCATATTGATCGAAAACTGAAATTTTGTTTGGATCCTAGCTCACATGACAAGAGTAAGAAAAGGGAGAAGAAATCGAAGCACAAATCCAAAAGAAGTGCAAGTGAAATGCAAAACTTACCTCCTGGTGCTTAA 1008 41.57 MADFQTSTHRSKWIFTPQDLIEKYKAANQRAKQTLEKYGVTRIEVDADGSLQYPEPQISAKDNAEKRSRPKPLNFEEERFMRSFYEYKIQEVCAAFSFPHKIQATALIYYKRFYLQWSVMEHHPKHIMLTCIYAACKIEENHVSAEELGKGIAQDHQMILNNEMIVLQSLDFDLIVFAPYRSVEGFVDDMEEFCQAKNDRLQMLKDLHKTAKMEVDKTMLTDAPLLFPPGQLALAALRRSNEVHQVLDFERYLSSILSRQDFSHAFSELTESLNAIDSWVMKHQVPTTEDMKHIDRKLKFCLDPSSHDKSKKREKKSKHKSKRSASEMQNLPPGA* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2484992 2493423 - Vvi14g219 Vvi14g219 775286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g219 335 PANTHER CYCLIN-H 1 331 - -
Vvi14g219 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Vvi14g219 335 SMART cyclin_7 87 168 IPR013763 -
Vvi14g219 335 Gene3D - 177 282 - -
Vvi14g219 335 PANTHER CYCLIN 1 331 IPR043198 GO:0006357|GO:0016538
Vvi14g219 335 CDD CYCLIN 81 167 IPR013763 -
Vvi14g219 335 Pfam Cyclin, N-terminal domain 71 174 IPR006671 -
Vvi14g219 335 MobiDBLite consensus disorder prediction 302 335 - -
Vvi14g219 335 Pfam Cyclin C-terminal domain 179 275 IPR031658 -
Vvi14g219 335 Gene3D - 63 175 - -
Vvi14g219 335 SUPERFAMILY Cyclin-like 6 176 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g219 K06634 - vvi:100252789 651.744