Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g227 ATGGGGTTCTTGGATGCCATACCAAATAAGCATTCACTCCAAGATTCATCCTCCTTTCTCAACACTACTACTGTCATAGCCCTCTGTTTGTTCTTTGCTCTTCTTTGTGCTTGCATAGTCATTGGCCATCTTCTTGAGGAGCACAGATGGGCCAACGAGTCAATCACCGCGCTTCTTTTGGGGTTGTGCGCGGGTGTGGTGGTGCTGTTGGTGAGTAAAGGCCGTAGTTCGAAAATTCTTGCGTTCAATGAGGACTTGTTCTTCCTCTATTTGCTTCCCCCAATCATTTTCAATGCTGGTTTCCAGGTAAAGAAGAAGCAATTTTTTAAGAATTTCTCAATAATATTGATGTTCGGAGTATTTGGTACCATAATATCCTTCTGCCTCATATCAGCAGGTGCCTTTCTTCTATTCAAAAAGATCGGCATTACAACCTTGAATATCGAAGACTACCTAGCTGTTGGCGCCATCTTGTCAGCAACGGATTCTGTTTGTACATTGCAGGTCCTCAATCAAGAAGAGACACCTTTCCTGTACAGTGTTGTATTCGGGGAGGGAGTGGTGAATGATGCTACTTCTATTGTGATTTATAATGCAGTTCAATCACTTGACTTAAGCAATATCGATGCTTTGACGGCCTTAAAATTGCTGGGGACCTTCCTTTACCTCTTTTTCACCAGTACTATCCTTGGTGTAGTGGCAGGTCTTTTGAGTGCCTACATCATAAAGACTCTTTATTTTGGAAGACATTCCACGGATCGTGAAGTTGCACTCATGATGATTATGGCTTATTTGTCATACATGTTGGCAGAGCTTTTATCTCTGAGTGGGATTTTAACAGTTTTCTTCTGTGGCATTGTCATGTCGCATTACACATGGCATAATGTTACCGAAAGCTCGCGAATAACAACCAAGCACGCATTTGCTACAATTTCCTTCATTGCAGAGACTTTTATATTTCTTTATGTCGGTATGGATGCCTTAGACATTGACAAATGGAGAAGCAGCAAAGCAAGTGCAGGAACTTCAGTTTCTGTCAGCTCGGCATTCCTAGCATTGGTGCTGATTGGAAGAGCAGCTTTCGTGTTCAGTCTTTCAAACATATTAAATTTCTTTAAAAGTGCAGAGAGCACAAAAGTTGAGTTCCGACAACAGTTTATAATATGGTGGGCAGGCCTAATGAGAGGTGCAGTTACCATTGCTCTGTCCTACAGCGAGTTCTCAGACTCTGAGACCACATCGACACAGGACTCTGCCCTAATGATCACCAGCACCATTATTGTTGTTCTTTTTAGTACAGTGGTTTTTGGTTCAATAACAAAGCCACTGATCGGAGCAGTGCTGCTAAGACATGCAAAACCAACAGTGTCTGATGCAACTGACATTGCAAGCCTGGAAGACTTGAGACTCCTATTCCTTGAAAATGGAGACCCCAGTGATGGTGGCAACAATCAACCAAGTCCAAAGGCAAGTAACTTGAGGCTGCTGATGAGATACCCAACATCAACAGCTCACTACTTCTGGAGAAAATTCGATGACAAATACATGAGACCGATGTTTGGTGGACGGGGTTTTGTTCCATATGTTCCTGGTTCACCAACTGGTGCACAAGATGAAACATCTTGA 1626 42.8 MGFLDAIPNKHSLQDSSSFLNTTTVIALCLFFALLCACIVIGHLLEEHRWANESITALLLGLCAGVVVLLVSKGRSSKILAFNEDLFFLYLLPPIIFNAGFQVKKKQFFKNFSIILMFGVFGTIISFCLISAGAFLLFKKIGITTLNIEDYLAVGAILSATDSVCTLQVLNQEETPFLYSVVFGEGVVNDATSIVIYNAVQSLDLSNIDALTALKLLGTFLYLFFTSTILGVVAGLLSAYIIKTLYFGRHSTDREVALMMIMAYLSYMLAELLSLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFLYVGMDALDIDKWRSSKASAGTSVSVSSAFLALVLIGRAAFVFSLSNILNFFKSAESTKVEFRQQFIIWWAGLMRGAVTIALSYSEFSDSETTSTQDSALMITSTIIVVLFSTVVFGSITKPLIGAVLLRHAKPTVSDATDIASLEDLRLLFLENGDPSDGGNNQPSPKASNLRLLMRYPTSTAHYFWRKFDDKYMRPMFGGRGFVPYVPGSPTGAQDETS* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2600403 2607034 - Vvi14g227 Vvi14g227 775294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g227 541 PANTHER SODIUM/HYDROGEN EXCHANGER 12 540 - -
Vvi14g227 541 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi14g227 541 Gene3D - 147 199 - -
Vvi14g227 541 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 453 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi14g227 541 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi14g227 541 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi14g227 541 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi14g227 541 PRINTS Na+/H+ exchanger signature 155 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi14g227 541 PANTHER SODIUM/HYDROGEN EXCHANGER 12 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g367 Vvi14g227 ECH
Vvi7g214 Vvi14g227 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g227 K14724 - vvi:100264772 1006.13