Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g241 ATGAGTGCCAGGAAGATCAAGAATGATGTGAATGTTCACAAGGATACTATAAGGGTTGATTGGGATGAGAAGAATTTGGACTCCCATTTGGTTTCTTTCACTTTTGATGCTCTGGTCGACGGCAGCATCACCATTTTTTACTTTGCCAAGGAAGGAAATAATTGTTCCTTCACTCCTTTATATCCCGAGATATACATGCCGATTAGAATTCCATTCCAAAATGGGTTGGGTCAAAAGTTCTGTCAGCGCTCAGGAACTGGCATTGACCTGGGCTTCTTTGCCCTAGATGACTTATCAAGGCCATCACAGAACGAAGAGGTGTTCCCACTGGTTATCTATGCAGAATCAAGTCTGCCATCACTTCCGCCAATGCATGAGCAGCTTGGTCAGCCTCCGCCTATCGCTCCTTCCCGTGCACAGATTACTCAAGCTGTGCTGGAGAAGAATAATGAGGGCCATTTCCAAGTGAAAGTCATCAAGCAGATCTTGTGGGTCGATGGAGTTCGCTATGAGCTACGTGAGCTCTATGGCATTGAAAATTCTGATGAAAGGGGTATTGGCAACAATGACACAGGGAAAGAATGTGTTATTTGCATGACGGAGCCAAATGATACTGTTGTTCTACCTTGTCGTCATGTGTGTTTATGCAGTGAATGTGCAAAGCAGCTAAGGCTTCAGTCAAATAAGTGTCCCGTATGTCGCCACCCCATCCAGGAACTCATAGTGATTGTCCATAAAGAACAATCCTAA 750 44.67 MSARKIKNDVNVHKDTIRVDWDEKNLDSHLVSFTFDALVDGSITIFYFAKEGNNCSFTPLYPEIYMPIRIPFQNGLGQKFCQRSGTGIDLGFFALDDLSRPSQNEEVFPLVIYAESSLPSLPPMHEQLGQPPPIAPSRAQITQAVLEKNNEGHFQVKVIKQILWVDGVRYELRELYGIENSDERGIGNNDTGKECVICMTEPNDTVVLPCRHVCLCSECAKQLRLQSNKCPVCRHPIQELIVIVHKEQS* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2856607 2864653 + Vvi14g241 Vvi14g241 775308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g241 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 244 IPR013083 -
Vvi14g241 249 ProSiteProfiles Zinc finger RING-type profile. 195 234 IPR001841 -
Vvi14g241 249 SMART ring_2 195 233 IPR001841 -
Vvi14g241 249 Pfam Zinc finger, C3HC4 type (RING finger) 193 239 - -
Vvi14g241 249 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL4 ISOFORM X1-RELATED 2 247 - -
Vvi14g241 249 SUPERFAMILY RING/U-box 194 240 - -
Vvi14g241 249 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 194 234 IPR045195 -
Vvi14g241 249 PANTHER MAHOGUNIN 2 247 IPR045194 GO:0061630
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g431 Vvi14g241 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g241 - - vvi:100852866 518.079