Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g247 ATGGGTGCTGTGACCCTCTTGGCTCTGGGTAATGGGGCTCCAGACGTCTTTGCGTCGGTGGCCGCTGTGCGTGGCGGGCATCCGAGGACTGGTTTTGGGGCGATTTTGTCGGCCGGTACGTTTGTTTCGGCGTTTGTGGTTGGGTTTGTGGCGATTTATGCCGCGCCGTTTTCGGTGGACCCGAGTCAGTTTGTGAGGGACGTGTTCTTTTACTTGGTGGCTGCGTTGTTCTTGTTCTATGTGTATTTGAGCGCGGAGATTTTTCTGTGGCAGGCTATTGGGTTTGTGGGGTTTTATGCGTTTTTTGTCGGGTTGGTGTTTTGGATGGATTTGGGGATTGGTGGAGGGAAGGAGAGAGGTGGGAGTGAGGTGGGGTTGATTGGGGAGGTCGAGATTGAGAAGGGTTTGGTGGGTTCTGGGGTTTTTGAGATTGGGGATGTGTTGAAGGATGTGGAGAGAGGGAAGGCCGGTTTCGGGTTCGGTGATGCACTTGGCAAGATCTCGAAAGCATGGGAACTTCCAGTTTCTTTACTTCTAAAGCTCACAATCCCACAAACTGAACCTTCAGAATGGAATAGGTTCTATCAATCTGCAAATATTGCTCTTTGCCCACTTGCCCTTTTGTACTCCTGTAATTCATTCATACCACTAAATCATCCCATCATTTTTCTCCTTCCACACACTCATTTTCCATTATGGTCTGTCGTACTCTTTGCAAGCTCCTCCCTTGCAGTTCTTCACTTCATAATAGAAAAAGAGCCCCCTGAAACTGAAAGAATGCCTGTGGTTCTTGTAGCCTTTATAATGAGTGTCTTTTGGATATCTACTGTTGCTGGGGAGCTCCTGAACTGCCTTGCAGCATTAGGGTCACTTCTTGAATTGCCTCCATCACTCCTTGGGCTCACAGTACTTGCATGGGGAAACTCAGTGGGAGATCTTGTTGCTGATGTGGCCATTGCCAAAGCAGGCCAGCCAGCAATGGCAATGGCTGGGTGCTTTGCTGGCCCAATGTTTAACATGCTTGTTGGACTTGGGACAGCTTTGGTGATACAAACTGCTAATATTTATCCCCAAGCTTATCAGCTCCATTTCCACACGGGTATTGTGATTGCATTTGTGTTCTTGCTGTCAAGCTTGATGGGGTCTCTGTTAGTTATAACTTGGGGTAGATTCCGGGTGCCTAGGTTCTGGGGTTTCTGCCTTGTTGGTCTCTATGTTGTATTTATGGTTGTTAGCATACTCATCGCAAAGTTTTCAGGCATGTTTTCACAGATCAACTTCTATATTTTGCACTTACCAGCCTGTTTTTCTTGCTTATTGTCAATTACTGCTGAATGTTACTTCTGGTTTATTTATATGTTGGAGGACATGGTAACTAGCAGACCCACTTTCTCAGCAACCATACCCTACCACCCATTGGCTCACCTTACTGAAATTTTTGTTCATGAGTTTATCACTGTCGCTTTGAGAATCTGA 1476 46.75 MGAVTLLALGNGAPDVFASVAAVRGGHPRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVDPSQFVRDVFFYLVAALFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFWMDLGIGGGKERGGSEVGLIGEVEIEKGLVGSGVFEIGDVLKDVERGKAGFGFGDALGKISKAWELPVSLLLKLTIPQTEPSEWNRFYQSANIALCPLALLYSCNSFIPLNHPIIFLLPHTHFPLWSVVLFASSSLAVLHFIIEKEPPETERMPVVLVAFIMSVFWISTVAGELLNCLAALGSLLELPPSLLGLTVLAWGNSVGDLVADVAIAKAGQPAMAMAGCFAGPMFNMLVGLGTALVIQTANIYPQAYQLHFHTGIVIAFVFLLSSLMGSLLVITWGRFRVPRFWGFCLVGLYVVFMVVSILIAKFSGMFSQINFYILHLPACFSCLLSITAECYFWFIYMLEDMVTSRPTFSATIPYHPLAHLTEIFVHEFITVALRI* 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2909952 2914570 + Vvi14g247 Vvi14g247 775314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g247 491 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 164 419 - -
Vvi14g247 491 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 115 - -
Vvi14g247 491 Pfam Sodium/calcium exchanger protein 4 107 IPR004837 GO:0016021|GO:0055085
Vvi14g247 491 Pfam Sodium/calcium exchanger protein 263 413 IPR004837 GO:0016021|GO:0055085
Vvi14g247 491 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 1 115 - -
Vvi14g247 491 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 164 419 - -
Vvi14g247 491 Gene3D - 197 416 IPR044880 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g247 K13754 - vvi:100256252 784.637