Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi14g26 | ATGGATAGAAGATGGTACAGTGGTAGACAGGAAACAAGCTCTCGTGATAATAGGCAACGTGAAAGGGAGGAGGCATATAAGGATTCACTTGTTGAGGATTTGGCAGAGGATTTTCGTTTGCCTATCAATCATAAGCCAACAGAAAATGTTGATCTAGATAATGTGGAGCAAGCATCATTGGACACACAATTGACATCATCTAATATTGGGTTTAGGCTTCTTCAAAAAATGGGTTGGAAAGGAAAGGGTCTTGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAGTCTGGAATTAGAGATCCAAGATTAGGGGTTGGAAAACAAGAGGAAGATGATTTTTTCACTGCAGAGGAAAATATTCAGCGAAAAAAGCTGGATGTCGAGCTAGAGGAGACAGAGGAACATGCAAAGAAGCGGGAGAAGGCAGCATATAGCATATATGTATGTCTTTTGACGGGAATGGTGGTAGCAGAACGTGAGCAGAAAATTCAGACAGAGGTGAAAGAAATACGAAAGGTGTTCTATTGTGAGCTCTGCAACAAGCAATACAAACTGGCTATGGAATTTGAAGTTCACTTGAGCTCATATGATCACAACCACAGAAAGAGGTTTAAGGAAATGAGAGAAATGCACGGTACTAGCAGTCGTGATGATCGGCAAAAACGAGAACAACAACGTCAAGAGCGGGAGATGGCTAAGTTTGCTCTGATGGCGGATGCTCGAAAGCAGCAGCAGCAGCAGGAAGAGGAATCTGGAAACACTGCAGTTTCCACCACACTGAGAAGTGCCACCCCACTTGCTGATCAAGAGCAGCGGAAAGCATTAAAGTTTGGGTTTTCCTCCAAAGGTGGCATGTCCAAGAATTCATCAGGCAGTGCAGCAAAGAAGCCAAAAGTTTCTGTTGCTTCAGTTTTCAGCAACGATAGTGATGAAGAATAG | 942 | 43.1 | MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASLDTQLTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHAKKREKAAYSIYVCLLTGMVVAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHLSSYDHNHRKRFKEMREMHGTSSRDDRQKREQQRQEREMAKFALMADARKQQQQQEEESGNTAVSTTLRSATPLADQEQRKALKFGFSSKGGMSKNSSGSAAKKPKVSVASVFSNDSDEE* | 314 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 321212 | 327475 | + | Vvi14g26 | Vvi14g26 | 775093 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi14g26 | 313 | MobiDBLite | consensus disorder prediction | 209 | 237 | - | - | |
| Vvi14g26 | 313 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 206 | IPR036236 | - | |
| Vvi14g26 | 313 | MobiDBLite | consensus disorder prediction | 209 | 313 | - | - | |
| Vvi14g26 | 313 | Coils | Coil | 123 | 143 | - | - | |
| Vvi14g26 | 313 | MobiDBLite | consensus disorder prediction | 283 | 307 | - | - | |
| Vvi14g26 | 313 | MobiDBLite | consensus disorder prediction | 248 | 267 | - | - | |
| Vvi14g26 | 313 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Vvi14g26 | 313 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 1 | 313 | - | - | |
| Vvi14g26 | 313 | Pfam | G-patch domain | 67 | 107 | IPR000467 | GO:0003676 | |
| Vvi14g26 | 313 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 177 | 199 | IPR013087 | - | |
| Vvi14g26 | 313 | Pfam | Zinc-finger double-stranded RNA-binding | 175 | 202 | IPR022755 | - | |
| Vvi14g26 | 313 | ProSiteProfiles | G-patch domain profile. | 66 | 111 | IPR000467 | GO:0003676 | |
| Vvi14g26 | 313 | SMART | G-patch_5 | 64 | 109 | IPR000467 | GO:0003676 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi14g26 | - | - | vvi:100244141 | 536.184 |