Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g263 ATGCAAGACATTTTCGGATCAGTTCGCCGGTCGCTCGTCCTCCGGTCACCCGATGGCGACGACACTTCCCCCGGAACCCTAGTCGACAAAATCAACTCTTGCATTCGCAAATCCAGAGTCTTCTCCAGAGCCTCCCCTCCGCCACTAATTCCCAAAGACGCCACTGCGCCTTCGATCCGATGTCGAAAAGGGGAGCTGATCGGCTGTGGCGCCTTCGGTCGTGTCTATATGGGCATGAATCTCGATTCTGGAGAGCTTATCGCCGTCAAACAGGTTTTGATCACCACAAGCAATGCTACAAAAGAGAAGGCACAGGCTCATATTAGGGAACTTGAAGAAGAAGTGAAGCTTCTTAAGAATCTCTCTCATCCAAACATTGTTAGGTATTTGGGTATAGTCAGGGAGGAGGAGACCTTGAATATTTTGTTGGAATTTGTTCCTGGTGGATCCATCTCATCACTTTTGGGGAAATTTGGATCTTTCCCTGAGGCTGTGATAAGAATGTACACAAAACAATTATTATTGGGACTAGATTATCTTCACAACAATGGAATTATGCACAGGGACATCAAGGGGGCAAACATCCTCGTCGATAATAAAGGATGCATTAAACTTGCAGATTTTGGTGCTTCCAAGCAGGTTGTGGAGCTGGCTACCATTTCAGGTGCCAAGTCCATGAAAGGCACCCCGTATTGGATGGCTCCGGAAGTCATTCTCCAGACAGGCCATAGCTTCTCGGCTGATATATGGAGTGTTGGATGTACCGTTATTGAGATGGCCACTGGAAAGCCTCCTTGGAGCCAAAAGTACCAAGAGGTTGCTGCTCTCTTTTATATTGGGACAACAAAGTCTCATCCGCCAATTCCTGCACATCTCTCTGCTGAGGCAAAAGATTTTCTACTGAAGTGTTTACAAAAGGAACCAGATTTGAGGCCAGCTGCCTATGAGTTGCTGAAGCATCCATTTGTTACTGGAGAGTATAACGAAGCTCAACTTGCTCTTCAAACTTCCGTTATGGAAAATTCTGAAACTCCTGTATCAACTTCTGAGGAAAACTTGCCAAATCCCTTGCTGGATGTCTGTGAGATGGGGAATTTGAGCTGCTCAACTGGATATCCTGAGAATTCAGAATCCAAACCTAATTGGGGAACAAGCAGCAGTATTGACATGTGTCAAATTGATGACAAAGATGATGTTATGATGGTTGGGGAAGTAAAGTTCAATTCTATCCTGCTGCCTGATAACTTTAATAAGAGTTTCAATCCGATTTCTGAGCCCTCACATGATTGGAGCTGTGAAATTGATGGAAATCTACGACCAGAACATAGTGGAATGGACATGGACACCAATCCATCTCTTGATATGCCTGCTGGTAGCTCTGGCATATCCAATAAGGGAGGCAATGATTTCTCATTTCCTTGTGGGCCATCAGTATCTGAGGATGATGATGAAGTTACTGAGTCAAAAATCAGAGACTTCCTGGATGAGAAGGCCATTGAACTGAAGAAACTGCAAACGCCATTATATGAGGAGTTCTACAACACTTTGAATGCTGCATGCTCTCCAAGTGTTGCTGAGCGTACACAGGATGAAAATGTTATAAACTACTTGAAATTGCCTCCTAAAAGCCGTTCACCAAGTCGGGCTCCAATTGGAACCCCATCTGCGGCTGTTGATTCCACTAGTACTGCGAGCCCTGGGAGTTGTGGCAGACGAATGTCAAATGTTGGCAATGCAGGTGATCAAACTGCACAGGACACCCCGTCACCTCCACATAATGACTGGAAAGGCCTTCTTGTTGATTCTCAGCAGGAACCTAATAGCCCAAGTGTGAGCTTTTATGAGATACAGAGGAAGTGGAAGGAGGAGCTTGACCAAGAACTAGAGAGAAAACGAGAGATGATGCGCCAAGCAGGGAAAACATCATCACCAAAGGATCGAGCTTTGAATCGGCCAAGAGAACGTTCAAGGTTTGCATCTCCAGGCAAATGA 1992 45.53 MQDIFGSVRRSLVLRSPDGDDTSPGTLVDKINSCIRKSRVFSRASPPPLIPKDATAPSIRCRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLITTSNATKEKAQAHIRELEEEVKLLKNLSHPNIVRYLGIVREEETLNILLEFVPGGSISSLLGKFGSFPEAVIRMYTKQLLLGLDYLHNNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQKYQEVAALFYIGTTKSHPPIPAHLSAEAKDFLLKCLQKEPDLRPAAYELLKHPFVTGEYNEAQLALQTSVMENSETPVSTSEENLPNPLLDVCEMGNLSCSTGYPENSESKPNWGTSSSIDMCQIDDKDDVMMVGEVKFNSILLPDNFNKSFNPISEPSHDWSCEIDGNLRPEHSGMDMDTNPSLDMPAGSSGISNKGGNDFSFPCGPSVSEDDDEVTESKIRDFLDEKAIELKKLQTPLYEEFYNTLNAACSPSVAERTQDENVINYLKLPPKSRSPSRAPIGTPSAAVDSTSTASPGSCGRRMSNVGNAGDQTAQDTPSPPHNDWKGLLVDSQQEPNSPSVSFYEIQRKWKEELDQELERKREMMRQAGKTSSPKDRALNRPRERSRFASPGK* 664
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 3063646 3072319 + Vvi14g263 Vvi14g263 775330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g263 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Vvi14g263 663 MobiDBLite consensus disorder prediction 548 590 - -
Vvi14g263 663 MobiDBLite consensus disorder prediction 630 663 - -
Vvi14g263 663 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Vvi14g263 663 Pfam Protein kinase domain 63 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g263 663 Gene3D Transferase(Phosphotransferase) domain 1 60 358 - -
Vvi14g263 663 Coils Coil 94 121 - -
Vvi14g263 663 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 629 - -
Vvi14g263 663 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 629 - -
Vvi14g263 663 SMART serkin_6 61 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g263 663 MobiDBLite consensus disorder prediction 600 614 - -
Vvi14g263 663 CDD STKc_MAPKKK 62 323 - -
Vvi14g263 663 ProSiteProfiles Protein kinase domain profile. 61 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g263 663 MobiDBLite consensus disorder prediction 538 614 - -
Vvi14g263 663 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Vvi14g263 663 Coils Coil 617 641 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi5g455 Vvi14g263 ECH
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76215 PF00069 Pkinase 6.90E-71 CL0016 Vvi PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g263 K20606 - vvi:100254531 1326.23