Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g263 | ATGCAAGACATTTTCGGATCAGTTCGCCGGTCGCTCGTCCTCCGGTCACCCGATGGCGACGACACTTCCCCCGGAACCCTAGTCGACAAAATCAACTCTTGCATTCGCAAATCCAGAGTCTTCTCCAGAGCCTCCCCTCCGCCACTAATTCCCAAAGACGCCACTGCGCCTTCGATCCGATGTCGAAAAGGGGAGCTGATCGGCTGTGGCGCCTTCGGTCGTGTCTATATGGGCATGAATCTCGATTCTGGAGAGCTTATCGCCGTCAAACAGGTTTTGATCACCACAAGCAATGCTACAAAAGAGAAGGCACAGGCTCATATTAGGGAACTTGAAGAAGAAGTGAAGCTTCTTAAGAATCTCTCTCATCCAAACATTGTTAGGTATTTGGGTATAGTCAGGGAGGAGGAGACCTTGAATATTTTGTTGGAATTTGTTCCTGGTGGATCCATCTCATCACTTTTGGGGAAATTTGGATCTTTCCCTGAGGCTGTGATAAGAATGTACACAAAACAATTATTATTGGGACTAGATTATCTTCACAACAATGGAATTATGCACAGGGACATCAAGGGGGCAAACATCCTCGTCGATAATAAAGGATGCATTAAACTTGCAGATTTTGGTGCTTCCAAGCAGGTTGTGGAGCTGGCTACCATTTCAGGTGCCAAGTCCATGAAAGGCACCCCGTATTGGATGGCTCCGGAAGTCATTCTCCAGACAGGCCATAGCTTCTCGGCTGATATATGGAGTGTTGGATGTACCGTTATTGAGATGGCCACTGGAAAGCCTCCTTGGAGCCAAAAGTACCAAGAGGTTGCTGCTCTCTTTTATATTGGGACAACAAAGTCTCATCCGCCAATTCCTGCACATCTCTCTGCTGAGGCAAAAGATTTTCTACTGAAGTGTTTACAAAAGGAACCAGATTTGAGGCCAGCTGCCTATGAGTTGCTGAAGCATCCATTTGTTACTGGAGAGTATAACGAAGCTCAACTTGCTCTTCAAACTTCCGTTATGGAAAATTCTGAAACTCCTGTATCAACTTCTGAGGAAAACTTGCCAAATCCCTTGCTGGATGTCTGTGAGATGGGGAATTTGAGCTGCTCAACTGGATATCCTGAGAATTCAGAATCCAAACCTAATTGGGGAACAAGCAGCAGTATTGACATGTGTCAAATTGATGACAAAGATGATGTTATGATGGTTGGGGAAGTAAAGTTCAATTCTATCCTGCTGCCTGATAACTTTAATAAGAGTTTCAATCCGATTTCTGAGCCCTCACATGATTGGAGCTGTGAAATTGATGGAAATCTACGACCAGAACATAGTGGAATGGACATGGACACCAATCCATCTCTTGATATGCCTGCTGGTAGCTCTGGCATATCCAATAAGGGAGGCAATGATTTCTCATTTCCTTGTGGGCCATCAGTATCTGAGGATGATGATGAAGTTACTGAGTCAAAAATCAGAGACTTCCTGGATGAGAAGGCCATTGAACTGAAGAAACTGCAAACGCCATTATATGAGGAGTTCTACAACACTTTGAATGCTGCATGCTCTCCAAGTGTTGCTGAGCGTACACAGGATGAAAATGTTATAAACTACTTGAAATTGCCTCCTAAAAGCCGTTCACCAAGTCGGGCTCCAATTGGAACCCCATCTGCGGCTGTTGATTCCACTAGTACTGCGAGCCCTGGGAGTTGTGGCAGACGAATGTCAAATGTTGGCAATGCAGGTGATCAAACTGCACAGGACACCCCGTCACCTCCACATAATGACTGGAAAGGCCTTCTTGTTGATTCTCAGCAGGAACCTAATAGCCCAAGTGTGAGCTTTTATGAGATACAGAGGAAGTGGAAGGAGGAGCTTGACCAAGAACTAGAGAGAAAACGAGAGATGATGCGCCAAGCAGGGAAAACATCATCACCAAAGGATCGAGCTTTGAATCGGCCAAGAGAACGTTCAAGGTTTGCATCTCCAGGCAAATGA | 1992 | 45.53 | MQDIFGSVRRSLVLRSPDGDDTSPGTLVDKINSCIRKSRVFSRASPPPLIPKDATAPSIRCRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLITTSNATKEKAQAHIRELEEEVKLLKNLSHPNIVRYLGIVREEETLNILLEFVPGGSISSLLGKFGSFPEAVIRMYTKQLLLGLDYLHNNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQKYQEVAALFYIGTTKSHPPIPAHLSAEAKDFLLKCLQKEPDLRPAAYELLKHPFVTGEYNEAQLALQTSVMENSETPVSTSEENLPNPLLDVCEMGNLSCSTGYPENSESKPNWGTSSSIDMCQIDDKDDVMMVGEVKFNSILLPDNFNKSFNPISEPSHDWSCEIDGNLRPEHSGMDMDTNPSLDMPAGSSGISNKGGNDFSFPCGPSVSEDDDEVTESKIRDFLDEKAIELKKLQTPLYEEFYNTLNAACSPSVAERTQDENVINYLKLPPKSRSPSRAPIGTPSAAVDSTSTASPGSCGRRMSNVGNAGDQTAQDTPSPPHNDWKGLLVDSQQEPNSPSVSFYEIQRKWKEELDQELERKREMMRQAGKTSSPKDRALNRPRERSRFASPGK* | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3063646 | 3072319 | + | Vvi14g263 | Vvi14g263 | 775330 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g263 | 663 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi14g263 | 663 | MobiDBLite | consensus disorder prediction | 548 | 590 | - | - | |
Vvi14g263 | 663 | MobiDBLite | consensus disorder prediction | 630 | 663 | - | - | |
Vvi14g263 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 351 | IPR011009 | - | |
Vvi14g263 | 663 | Pfam | Protein kinase domain | 63 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g263 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 60 | 358 | - | - | |
Vvi14g263 | 663 | Coils | Coil | 94 | 121 | - | - | |
Vvi14g263 | 663 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 629 | - | - | |
Vvi14g263 | 663 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 | 1 | 629 | - | - | |
Vvi14g263 | 663 | SMART | serkin_6 | 61 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g263 | 663 | MobiDBLite | consensus disorder prediction | 600 | 614 | - | - | |
Vvi14g263 | 663 | CDD | STKc_MAPKKK | 62 | 323 | - | - | |
Vvi14g263 | 663 | ProSiteProfiles | Protein kinase domain profile. | 61 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g263 | 663 | MobiDBLite | consensus disorder prediction | 538 | 614 | - | - | |
Vvi14g263 | 663 | ProSitePatterns | Protein kinases ATP-binding region signature. | 67 | 90 | IPR017441 | GO:0005524 | |
Vvi14g263 | 663 | Coils | Coil | 617 | 641 | - | - |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76215 | PF00069 | Pkinase | 6.90E-71 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g263 | K20606 | - | vvi:100254531 | 1326.23 |