Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g31 ATGGTCAAAAAGCCACTTGACAACCAGCAGAACACCATAACAGCCATTCGAGGACAGGAACTCTTCCCTGTGAGGTTCAGTACAGCAACGTACTTAGGCAGACCATGGAAGCGATATTCAAGAACAGTTGTTATGGAATCAACACTGGGCGATTTGATTCATCCTAAAGGATGGTTGGCAAGGAATGGCACATTTGCAGTTGACACACTACTCTATGCTGAGTATGCCAACAAGGGGCCTGGAGCTGATACCAGCGGGAGAGTCGACTGGAAGGGTTACAAGGTCATCACCAACAGAACAGAAGCACTAGCCTATACAGTTGCTCCTTTTATTCAAGGAGACCAGTGGTTGAAAAGGAGTGGGATGCCCTTCCTCCTTGGCCTCAAACTTTGA 393 47.58 MVKKPLDNQQNTITAIRGQELFPVRFSTATYLGRPWKRYSRTVVMESTLGDLIHPKGWLARNGTFAVDTLLYAEYANKGPGADTSGRVDWKGYKVITNRTEALAYTVAPFIQGDQWLKRSGMPFLLGLKL* 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 371096 371605 - Vvi14g31 Vvi14g31 775098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g31 130 SUPERFAMILY Pectin lyase-like 4 127 IPR011050 -
Vvi14g31 130 PANTHER PECTINESTERASE 19 128 - -
Vvi14g31 130 Pfam Pectinesterase 18 114 IPR000070 GO:0030599|GO:0042545
Vvi14g31 130 Gene3D - 2 128 IPR012334 -
Vvi14g31 130 PANTHER PECTINESTERASE 19 128 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g259 Vvi14g31 ECH
Vvi7g513 Vvi14g31 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g31 K01051 - vvi:104877410 258.07