Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g32 ATGGTGTCTGCTGGATTGCAGTCTTTGATTGATCATGAAGACAGTCTCAAGAGCCAGTTGAGTGCAGTTATCTCATATCAACAAACATGCAAGGATGGAATTAAACACCCATCAATCAGAGCAGTAATTGGGCTCAGGCTTCAGACTGTCACTGAGCTCACAAGCAATGCTTTAGCACTGGCAGAGGCTAGAGATGGTGGGTACCCTACTTGGTTCTCAGCAACTGACTGTGGGCTCTCGGAGTTACATGGCAAGGGGCTTCTGAAGCCCAATGTAGTTGTAGCTAAAGATGGCAGTGGGCAGTACAGAACAGTATTTGAAGCTGTTGTTGCATACTCTGAAAACAGGAACCACAGGGGGACATATGTCATCTATGTGAAGTCTGGAATGTATGAGGAGAACATCACCCTCAAAGTCCGCTGGGGTACAGTATCCATGTATGGTGATGGACCTAGAAAGACGATCATCACTGGCCGAAAGAATTGCCATGACCAATTTACGGCCCTGCGGACAGCCACCTTCTCTGTTCGTGGAAAAGGATTCATTGGCAGGTCAATGGCATTCCGGAACACAGCTGGGCCAGAAGGTGGCCAAGCCGTGGCTCTCCAAGTTCAGGCTGATATGTCAGCCTTCTTTAACTGCAGGATAGATGGGTACGAGGGCACTCTGCATGCACTAGCCCATCGCCAATTCTACAGAGAGTAA 705 48.65 MVSAGLQSLIDHEDSLKSQLSAVISYQQTCKDGIKHPSIRAVIGLRLQTVTELTSNALALAEARDGGYPTWFSATDCGLSELHGKGLLKPNVVVAKDGSGQYRTVFEAVVAYSENRNHRGTYVIYVKSGMYEENITLKVRWGTVSMYGDGPRKTIITGRKNCHDQFTALRTATFSVRGKGFIGRSMAFRNTAGPEGGQAVALQVQADMSAFFNCRIDGYEGTLHALAHRQFYRE* 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 371622 372796 - Vvi14g32 Vvi14g32 775099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g32 234 Pfam Pectinesterase 91 234 IPR000070 GO:0030599|GO:0042545
Vvi14g32 234 Pfam Plant invertase/pectin methylesterase inhibitor 13 60 IPR006501 GO:0004857
Vvi14g32 234 Gene3D - 86 234 IPR012334 -
Vvi14g32 234 SUPERFAMILY Pectin lyase-like 89 234 IPR011050 -
Vvi14g32 234 PANTHER PECTINESTERASE 4-RELATED 8 233 - -
Vvi14g32 234 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 63 IPR035513 -
Vvi14g32 234 PANTHER PECTINESTERASE 8 233 - -
Vvi14g32 234 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 14 61 IPR035513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g512 Vvi14g32 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g32 K01051 - cpap:110808311 236.884