Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g338 ATGGCTTTTGTCATCACTATTACTACCTTGGTTCTGTATTTCCGAGGATCTACTAAGGAGCAGGATCCTTTACCCGCATCTACTGCTCAACTCGACCCTCCAAAGATTCTGCCTGATATCACTGATCAGACTGGTGGAGAATCAGATTTTCTCACACCCCATAAGAAACTCCTTCACTCAATTAACGCGGTTGAGAAAGCAATGAGGAAGAATTGGGGAAACTGTAGAGAATTCCAATGCAAAGAAGGCCCTGAGAGAAAAAAGGGGTATGTCAATGGGTCGATTGACGGAGTTTTGTTTGGAATTCAGGGAAATGAAGATGGAAACAACAGAACCGATAAGGATCAGAAGAAAGTAGAATTGACAACGAGCCTAACTGAAAAAATGGCCGCCAAACAAGAAGTTGAGAAGGGTAATGCCAATATAACAGAGCCACTTATTGTGCAAGAGAAGCAAGGAGAAGCACAAATCAAGAGCAACAATGGTGGTCTACGAATGGTTCTTCTTAGTATATTTGTTGCTGTCTGTGGCTCTTTCGAATTTGGGTCATGTGCAGGATACTCTGCACCTGCCCAGTATGGCATAATGAATGAGCTTGGGCTGTCTTACTCACAGTACTCAGTTTTTGGATCCATATTGTCCATTGGTGCAATGATCGGTGCCATCTCAAGTGGGTGGATTGCTGATTCCATTGGTCGAAAAGGGGCCATGAGAATGTCATCCATGGTCTGTATTGCAGGATGGATCACGGTCTACTTATCTTTTGGATCTGTTTCTCTTGATTCTGGCAGATTTTTACTAGGATATGGTATTGGTATTCTTTCTTATGTGATACCAGTGTTCATTGCTGAAATAACACCTAAAAATCATCGAGGAACACTAGCAACAGCAAATCAGCTCTTTATTGTTACTGGGTTGTTCATTGCCTTTGTAGTAGGTGCATTTGTAACATGGAGGACATTGGCGTTAACCGGAATCCTCCCATGCATGGTTCTGCTAGTGGGTCTATTTTTCATTCCAGAGTCCCCTAGATGGCTGGCAAGGGCTGGCTATGAGAGAGAATTTAAAGCTGAACTACAAAAGCTTAGGGGTGTAGAAGCTGATATTTCTGAAGAAGAGGCTGAAATCCAAGAATATATGGTAACTCATCAGCTCCTTCCTAAAGTTGGCATAATGGTTTTGCTTGATAAACAAAATGTCCGTTCGGTCATTGTTGGAGTTGGTTTGATGGTGTTTCAGCAGTTCGGGGGGTACAATGGGATTGTCTTCTATGCTGATCAAATCTTTGTATCTGCAGGAGTCCCTCCTAACCTAGGAGGCATTCTCTATTCTTCTCTACAGGTCATTGTTACTGCATTTGGGGCAAGCTTAATTGACAGACTTGGGAGAAGACCCCTTTTAATGGTTTCTGCATTTGGTTTGCTTCTTGGATGTCTACTAACTGGAATTTCCTTCTTTCTAAAGGCCCATCAACTGGCACCCAATTTGGTTCCAATCCTTGCAGTGACCGGCATCATGGTTCATATAGGCTTCTATTCAGTGGGATTGGGGCCAATTCCTTGGCTTATAATGTCTGAGATCTTCCCACTACATGTAAAGGCAATTGCTGGAAGCCTAGTGACATTGGTGAACTGGTTTGGTGCTTGGGCCGTATCCTACACTTTTAACTTTCTCATGAACTGGAGCTCACATGGTACATTTTTCGGGTATGCTTTTGTTTGTGCAGCAGCTATAGTATTCATAATCATGGTGGTACCTGAAACAAAAGGCCAAACTCTCGAAGAAATTCAAGCTTCCATGAACCGGTGA 1809 42.9 MAFVITITTLVLYFRGSTKEQDPLPASTAQLDPPKILPDITDQTGGESDFLTPHKKLLHSINAVEKAMRKNWGNCREFQCKEGPERKKGYVNGSIDGVLFGIQGNEDGNNRTDKDQKKVELTTSLTEKMAAKQEVEKGNANITEPLIVQEKQGEAQIKSNNGGLRMVLLSIFVAVCGSFEFGSCAGYSAPAQYGIMNELGLSYSQYSVFGSILSIGAMIGAISSGWIADSIGRKGAMRMSSMVCIAGWITVYLSFGSVSLDSGRFLLGYGIGILSYVIPVFIAEITPKNHRGTLATANQLFIVTGLFIAFVVGAFVTWRTLALTGILPCMVLLVGLFFIPESPRWLARAGYEREFKAELQKLRGVEADISEEEAEIQEYMVTHQLLPKVGIMVLLDKQNVRSVIVGVGLMVFQQFGGYNGIVFYADQIFVSAGVPPNLGGILYSSLQVIVTAFGASLIDRLGRRPLLMVSAFGLLLGCLLTGISFFLKAHQLAPNLVPILAVTGIMVHIGFYSVGLGPIPWLIMSEIFPLHVKAIAGSLVTLVNWFGAWAVSYTFNFLMNWSSHGTFFGYAFVCAAAIVFIIMVVPETKGQTLEEIQASMNR* 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4176643 4185717 - Vvi14g338 Vvi14g338 775405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g338 602 PRINTS Sugar transporter signature 261 280 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g338 602 PRINTS Sugar transporter signature 413 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g338 602 PRINTS Sugar transporter signature 502 523 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g338 602 PRINTS Sugar transporter signature 525 537 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g338 602 Pfam Sugar (and other) transporter 192 598 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi14g338 602 Gene3D MFS general substrate transporter like domains 163 602 IPR036259 -
Vvi14g338 602 TIGRFAM SP: MFS transporter, sugar porter (SP) family 118 596 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g338 602 SUPERFAMILY MFS general substrate transporter 171 597 IPR036259 -
Vvi14g338 602 Coils Coil 355 382 - -
Vvi14g338 602 ProSiteProfiles Major facilitator superfamily (MFS) profile. 170 589 IPR020846 GO:0022857
Vvi14g338 602 PANTHER - 151 600 - -
Vvi14g338 602 PANTHER SUGAR TRANSPORTER ERD6-LIKE 8 151 600 - -
Vvi14g338 602 ProSitePatterns Sugar transport proteins signature 1. 224 241 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vvi14g338 602 CDD MFS_GLUT6_8_Class3_like 168 595 IPR044775 GO:0008643|GO:0051119
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g393 Vvi14g338 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g338 K03444 - vvi:100264207 1113.21