Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g339 ATGTCTTCCTTCCTATCCATTGTCTTTGCATTAGGGCTAATCTTAGGGTTTTCCCGGGTTAGTTTCGCCCTCGAAAATGGCTACAAAATTTCACATAGAAAACTAGTTGAACCCGGTCCCTCATGTCCTCTGAACTTTGATGTTTTCAGGAAAATGGTGGTGGAAGGCATTCCCAGGCCTTCTTTTCGTGATGTCCCAACACAGTGCAATTATGTTCTTGAAGGGATCCGCGTAATTCGATCTGAATACCTCCGAACCGATGGGTACTTTCTTCCTCCTTCAAGTACTACCAAGGTTTGTTGGGAGTCCTACCGGCTCTTGGTAAGCGACTTGGTGAGTGGTTTTGACATAGAATTGGCTTGTGGCTATCATCCTGAATGGGTTTCAGAGAGTTGTATGAATATTTCATCTGGGTCAGAGTTTGAAAGCTTGATTCCAGAGTCCAAGTTGCAGGAAGTTAGGTGTTACTGCAACCAGTCTCTGGGCAATAGTACTTCTTGTGCATTGTGTAAAGAGAATTTGGGGAGTCTCCAGGCATCTTACCTTAGTGGATCAGGGATTGGAAATGCCTCTGACTGTGCTGGATATTCCTTTATGTATGCAGCTGGTTGGGTTAATCCATATGGCCCAACAGATGTTGCCACTGCGAAGTGTCTGTTCTCACTTGACTTCTCCCCACATCATATAAGAAATAAGAGATATAAGATTCTGATTTCTGGGGCTGTGTTAGGTTGTGTTATTGGGTTCTTTGGGGCTTTTGCAGCAGCTTGGTTTCTCTGGACAAGACACAGAAAATTGGAGAGGGAGATGGAAGTTTGTGCTAAAATGGAGACTAGTTTGGACTCAGGTTTTGGCTCTATGACTGGGAGTGACACACTGGTGAAGTTCAAGTTTGAGGAAATCAAAAGGGCTACCATGAATTTCTCAAGGGAGAATATAATTGGGCAGGGAGGATATGGGAATGTCTACAAGGGGATACTACCAGATGGGTCTGAAGTTGCCTTCAAAAGGTTCAAGAACTGCTCTGCATCTGGGGATGCAGTTTTTACGCATGAAGTAGAGGTCTTAGCTAGCGTTAGGCACATGAATCTTGTTGTTTTGAGAGGCTATTGTACTGCGACGGTTCCCATGGAAGGCCACCAGAGAATAATTGTGTGCGACTTGATGCCTAATGGAAGCCTCCATGACCATCTTTTTGGATCAGAAAAAATGGCAACCAGACAAGATGTTGAGAAGGGTAATGACACTATAACAAAGCCACTTATTGGGCAAAAAAAAGAAGTACAAATCCAGAGCAACAATGGTGGACTATGGGTGGTTCTTCTTAGTACATTGGTTGCTGTCTGTGGCTCTTTCGAGTTTGGGTCATGTGTAGGATACTCTGCACCTGCCGAGTATGGTATAATGGATGACCTTGGGATATCTTACTCAGAGTACTCATTTTTTGGGTCCATATTGACCATTGGTGCAATGATTGGTGCTATCACGAGTGGGCAGATTGCTGATTTTATTGGTCGAAAAGGGGCCATGGGGATGTCGTCCATGATCTGTATAGCAGGATGGTTCACAGTCTACTTATCTTTTGGATCTTTTTCCCTTTATTCTGGGAGATTTTTACTAGGATATGGAATTGGTGTTCTTTCTTATGTGGTACCAGTCTTCATTGCTGAAATAACACCTAAGAATCTTCGAGGAGCACTAGCAACAGCAAATCAGCTCTTTATTGTCACTGGCCTGTTCATTGCCTATGTTATAGGTGCAATCGTAACATGGAGGATATTGGCTTTAACAGGAATTGTCCCATGCATGGTTCTTCTCGTGGGTCTCTTTTTCATTCCAGAGTCCCCTAGATGGCTGGCAAAAGTTGGCAATGAGAAAGAATTTAAACTTTCACTACAAAAGCTTCGGGGCGCAGATGCTGATATTTCTGAAGAAGTGGCTGAAATCCAAGAATATATAGTGACTCATGAGCTCCTCCCTAAAGTCACAATAATGGATTTGCTTGGTAAACAAAACATCCGCTCAGTCGTTGTTGGAGTTGGTTTGATGGTTTTTCAGCAGTTTGGAGGAATTAATGGAATTGTATTCTATGCTGGTCAAATCTTTGTATCTGCAGGAGTCCCTCCCAATGTTGGAGGCATTCTTTATGCTTGTCTACAGGTCATTGTTACTGCATTTGGAGGAAGCTTAATTGACAGACTTGGGAGAAGACCCCTTTTGATAGTTTCTGCATATGGTATGCTTCTTGGCTGTCTATTAACTGGAACTTCCTTCCTTCTAAAGGCCCATCAGCTGGCAACCAATTTGGTTCCAATCCTTGCAGTGACTGGCATTTTGGTTTATATAGGCTTCTATTCAGTAGGATTAGGAGCAATTCCTTGGGTTATAATGTCTGAGATCTTCCCACTACACATAAAGGGAACTGCTGGAAGCCTAGTGACATTAGTGAATTGGTGTGGTTCTTGGGCTGTATCCTACACTTTTAACTTTCTCATGAATTGGAGCTCACACGGTACATTTTTTGGATATGCATTTGTTTGTGCAGCAGCCGTAGTATTCATAGTCATGCTGGTACCTGAAACAAAAGGCCGAACTCTTGAAGAAATTCAAGCTTCCATGAACTGA 2625 43.01 MSSFLSIVFALGLILGFSRVSFALENGYKISHRKLVEPGPSCPLNFDVFRKMVVEGIPRPSFRDVPTQCNYVLEGIRVIRSEYLRTDGYFLPPSSTTKVCWESYRLLVSDLVSGFDIELACGYHPEWVSESCMNISSGSEFESLIPESKLQEVRCYCNQSLGNSTSCALCKENLGSLQASYLSGSGIGNASDCAGYSFMYAAGWVNPYGPTDVATAKCLFSLDFSPHHIRNKRYKILISGAVLGCVIGFFGAFAAAWFLWTRHRKLEREMEVCAKMETSLDSGFGSMTGSDTLVKFKFEEIKRATMNFSRENIIGQGGYGNVYKGILPDGSEVAFKRFKNCSASGDAVFTHEVEVLASVRHMNLVVLRGYCTATVPMEGHQRIIVCDLMPNGSLHDHLFGSEKMATRQDVEKGNDTITKPLIGQKKEVQIQSNNGGLWVVLLSTLVAVCGSFEFGSCVGYSAPAEYGIMDDLGISYSEYSFFGSILTIGAMIGAITSGQIADFIGRKGAMGMSSMICIAGWFTVYLSFGSFSLYSGRFLLGYGIGVLSYVVPVFIAEITPKNLRGALATANQLFIVTGLFIAYVIGAIVTWRILALTGIVPCMVLLVGLFFIPESPRWLAKVGNEKEFKLSLQKLRGADADISEEVAEIQEYIVTHELLPKVTIMDLLGKQNIRSVVVGVGLMVFQQFGGINGIVFYAGQIFVSAGVPPNVGGILYACLQVIVTAFGGSLIDRLGRRPLLIVSAYGMLLGCLLTGTSFLLKAHQLATNLVPILAVTGILVYIGFYSVGLGAIPWVIMSEIFPLHIKGTAGSLVTLVNWCGSWAVSYTFNFLMNWSSHGTFFGYAFVCAAAVVFIVMLVPETKGRTLEEIQASMN* 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4185716 4195793 - Vvi14g339 Vvi14g339 775406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g339 874 Coils Coil 866 874 - -
Vvi14g339 874 ProSiteProfiles Major facilitator superfamily (MFS) profile. 443 862 IPR020846 GO:0022857
Vvi14g339 874 Pfam SPARK 40 191 IPR043891 -
Vvi14g339 874 PRINTS Sugar transporter signature 534 553 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g339 874 PRINTS Sugar transporter signature 686 696 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g339 874 PRINTS Sugar transporter signature 775 796 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g339 874 PRINTS Sugar transporter signature 798 810 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g339 874 PANTHER - 424 873 - -
Vvi14g339 874 TIGRFAM SP: MFS transporter, sugar porter (SP) family 411 869 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi14g339 874 SUPERFAMILY MFS general substrate transporter 444 870 IPR036259 -
Vvi14g339 874 Pfam Protein kinase domain 309 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g339 874 Gene3D Phosphorylase Kinase; domain 1 271 387 - -
Vvi14g339 874 ProSitePatterns Sugar transport proteins signature 1. 497 514 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vvi14g339 874 CDD MFS_GLUT6_8_Class3_like 441 868 IPR044775 GO:0008643|GO:0051119
Vvi14g339 874 SUPERFAMILY Protein kinase-like (PK-like) 287 403 IPR011009 -
Vvi14g339 874 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Vvi14g339 874 Pfam Sugar (and other) transporter 475 871 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi14g339 874 PANTHER SUGAR TRANSPORTER ERD6-LIKE 8 424 873 - -
Vvi14g339 874 Gene3D MFS general substrate transporter like domains 436 874 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g392 Vvi14g339 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76218 PF00083 Sugar_tr 2.90E-90 CL0015 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g339 K03444 - vvi:100264207 915.605