Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g345 ATGGCCGGGAGTAATGAAGTCAACCTCAGTGAGTCCAAGAGGGTGGTTCCACTAAATACATGGATTCTAATATCCAATTTCAAGCTGGCTTACAATCTTCTGCGCCGTCCTGATGGCACCTTCAATCGCCACTTGGCTGAGTTCCTTGACAGGAAAGTCCCTGCCAATGCAAACCCAGTTGAGGGGGTGTTCTCTTTTGATGTCATCATCGACCGGAGCACAAGTCTCCTTAGCCGAATCTATCGACCGGCCACAGGAGAAGAAGCTCTCCCCAGCATCATGGAGCTTGAAAAGCCGGTGACGGGTGATATTGTTCCTGTCATACTTTTCTTCCACGGTGGGAGCTTTGCACATTCCTCTGCTAATAGTGCAATATATGACACACTTTGCCGGCGCCTTGTTGGCATATGCAAGGCTGTTGTTGTGTCTGTGAATTATCGGCGAGCACCTGAAAACCCATACCCTTGTGCCTATGATGATGGCTGGGCTGCTCTTAAGTGGGTTAACTCGAGGCCATGGCTTAAAAGTGAGGAGGACTCAAAAGTTCATATATACATGGTTGGGGATAGCTCTGGGGGCAACATTGTTCACAATGTTGCTTTGAAGGCAGTAGAATCCGGAATTGAAGTATTGGGAAATATACTACTGAACCCAATGTTTGGTGGACAAGAGAGAACTGAATCAGAAAAGCGTTTAGATGGAAAATATTTTGTCACTATCCAAGACCGGGACTGGTACTGGAGAGCTTTTCTCCCTGAAGGGGAAGATAGGGACCATGCGGCCTGTAACCCTTTTGGTCCCAATGGTAAAAGCCTTGTAGGAATGAAATTCCCCAAGAGTCTTGTTGTGGTTGCTGGGTTGGATCTTGTTCAGGATTGGCAATTGGCTTATGTTGAAGGGCTTAAGAAAGCTGGTCAAGAGGTGAAACATCTATACCTGGACAAGGCAACAATCGGCTTCTACTTGTTGCCAAACAACGACCACTTCTATACTGTCATGGATGAGATAAGTAACTTTATGTTGAAGATGATAAGTTTGGAGAGATTGGCAATGGAGACAAATGCAAAAATTGGCTTCTGGTTCAAGGTCACACTGCTATGCAACATGTCCATGGAAAGTCACTGTCATCAAATGAGTTTTCCTTTGTTTATTGTTGGGCAAATCTGA 1167 45.59 MAGSNEVNLSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVKHLYLDKATIGFYLLPNNDHFYTVMDEISNFMLKMISLERLAMETNAKIGFWFKVTLLCNMSMESHCHQMSFPLFIVGQI* 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4293874 4298211 - Vvi14g345 Vvi14g345 775412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g345 388 PANTHER GIBBERELLIN RECEPTOR GID1C 2 341 - -
Vvi14g345 388 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vvi14g345 388 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Vvi14g345 388 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Vvi14g345 388 SUPERFAMILY alpha/beta-Hydrolases 51 340 IPR029058 -
Vvi14g345 388 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g345 K14493 - rcu:8288487 619.387