Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g373 | ATGATGGCTTCCCAGTTTGGTTCAATGTTGACAAGGTTGGGTAATCTATCCACTTCTGATCATGCTTCTGTGGTGTCCATCAATCTATTTGTGGCACTCCTTTGTGGTTGCATTGTGATTGGTCATCTTCTTGAGGAGAACCGGTGGGTGAATGAGTCAATCACTGCCCTTGTGATTGGTGTGTGTACTGGAGTTGTTATTTTGCTGACAAGTGGGGGAAGAAGCTCACATCTTCTGGTCTTCAGTGAAGATCTTTTCTTTATATATCTTCTTCCGCCCATTATATTTAATGCTGGGTTTCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTTATCACTATCATGCTGTTTGGTGCGGTTGGAACACTAATATCTTGTGGCATAATAACATCAGGTGTTATGCAATTCTTTAGTAAATTGGATATTGGTTCCTTCGATATAGGAGATTATCTAGCCATTGGTGCGATATTTTCAGCAACAGATTCTGTTTGCACGTTGCAGGTGCTTAACCAGGATGAGACGCCTTTACTTTATAGCCTGGTCTTTGGGGAGGGGGTTGTAAATGATGCAGCATCAGTTGTTCTTTTCAATGCAATCCAGAGCTTTGATCTCACCCACACCAATCTCAGGATTGCTTTGCAGTTTATTGGCAACTTTTTTTATTTATTTTTTACAAGCACTATGCTAGGAGTCGTAGCTGGGTTGCTCAGTGCTTACATTATCAAAACTTTGTATTTTGGCAGGCACTCTACTGATCGGGAGGTTGCCCTTATGATGCTTATGGCATACCTTTCCTACATACTTGCTGAACTATTCTATTTGAGTGGCATTCTCACGGTATTTTTCTGTGGGATTGTAATGTCCCATTACACGTGGCACAATGTTACAGAGAGTTCAAGAGTCACTACCAAGCATGCTTTTGCGACCTTGTCATTTGTAGCTGAGATTTTCATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAGAAATGGAGATTTGTGAGCAAAACTCCTGGAACATCAGTTGCTGTGAGTTCGATACTGATAGGTTTGGTTCTGGTTGGAAGAGCAGCTTTTGTTTTTCCCCTATCCTTTTTATCCAACTTAGCCAAGAAGAACCCAACTGAAAAAATCACTTTCAGGCAGCAAGTTATAATATGGTGGGCTGGTCTCATGAGGGGTGCTGTGTCTGTGGCCCTTGCTTATAATCAGTTTGCAAGGTCGGGACATACTCAATTGCGATCAAATGCAATCATGATTACCAGCACCATAACAGTTGTTCTTTTCAGCACAGTGGTATTTGGTTTAATGACTCAACCTCTTATAAGATTCTTGCTTCCTCATTCAAAAAACACAACCAGCATGGTATATTCAGACTCATCAACTCCAAAATCGTTTGCGGTGCCACTTCTTGAGAGCGCACAGAACTCTGATGCTGATATGGGTGGCCATGGTTTCCCACGCCCTAGTAGCCTTCGCATGCTCCTGACAACCCCGTCTCGCAGTGTTCATCACTACTGGCGCAAGTTTGATGATGCCATTATGCGTCCAATGTTTGGTGGGCGGGGTTTTGTCCCATTCGTTCCTGGCTCACCAACTGAAAGGTCTGCCCCTCAGTAA | 1623 | 42.82 | MMASQFGSMLTRLGNLSTSDHASVVSINLFVALLCGCIVIGHLLEENRWVNESITALVIGVCTGVVILLTSGGRSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTLISCGIITSGVMQFFSKLDIGSFDIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDAASVVLFNAIQSFDLTHTNLRIALQFIGNFFYLFFTSTMLGVVAGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSKTPGTSVAVSSILIGLVLVGRAAFVFPLSFLSNLAKKNPTEKITFRQQVIIWWAGLMRGAVSVALAYNQFARSGHTQLRSNAIMITSTITVVLFSTVVFGLMTQPLIRFLLPHSKNTTSMVYSDSSTPKSFAVPLLESAQNSDADMGGHGFPRPSSLRMLLTTPSRSVHHYWRKFDDAIMRPMFGGRGFVPFVPGSPTERSAPQ* | 541 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4884367 | 4918654 | + | Vvi14g373 | Vvi14g373 | 775440 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g373 | 540 | Pfam | Sodium/hydrogen exchanger family | 29 | 443 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Vvi14g373 | 540 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 9 | 539 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Vvi14g373 | 540 | TIGRFAM | b_cpa1: sodium/hydrogen exchanger 3 | 26 | 453 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Vvi14g373 | 540 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 9 | 539 | - | - | |
Vvi14g373 | 540 | Gene3D | - | 147 | 198 | - | - | |
Vvi14g373 | 540 | PRINTS | Na+/H+ exchanger signature | 85 | 96 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Vvi14g373 | 540 | PRINTS | Na+/H+ exchanger signature | 99 | 113 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Vvi14g373 | 540 | PRINTS | Na+/H+ exchanger signature | 114 | 122 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Vvi14g373 | 540 | PRINTS | Na+/H+ exchanger signature | 154 | 164 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g373 | - | - | vvi:100259022 | 1055.82 |