Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g39 | ATGACAACTGATCTTAATGCTGAACTATCCAAGAAAACTGATGTCTTGGGTCTCAAGGTTTGGGAATTGATTGGGATTGTTGTCGCATTATTCATCATAATTATCCTGTGTGTGTTATCATTGTGTCTCACTTCAAGGAAGAAATCAAGAAGTTCTAGAGATAGGCTTCCCGTTAATCAAATCCCAACTGTTTCAAAGGAAATCAAGGAAGTAAGGGTGGAGCAAGTATCGACAAATGAATTTGTTCCACGTGATGGGATTCTTCTTACCATTCATGACAAATCCAGTGACAAAGAATCAGATAAGGTCCTGGTCCATTTGGGTATGGGGAAGACAAAGAATGGAGATAATAGCAGTCAATCTGGTTCATTTCATCATTTAGAGAAAGATGGATGTGGGTCTCAATCAGGGGAAGAAGGGAGCTCTGGCACAGTTACCGTGTACAAGCCTTCTTCATCATATCCAATAACTGCTCCTTCTCCTCTTGTTGGTTTGCCTGAATTCTCTCATTTGGGTTGGGGTCACTGGTTCACATTAAGGGATCTTGAACTTGCGACAAATCGGTTTTCAAAGGAAAATGTGCTTGGTGAAGGTGGATATGGAGTGGTTTACAGAGGACAGTTGATCAATGGGACGCCAGTGGCAGTTAAAAAGATCCTCAACAACCTGGGTCAAGCAGAGAAAGAATTTAGAGTTGAAGTTGAAGCTATTGGGCATGTGCGCCACAAGAATTTGGTTCGGCTTCTTGGATATTGCATTGAAGGGACCCATAGGATGTTGGTCTATGAGTATGTCAGCAATGGGAATTTGGAGCAATGGCTTCATGGAGCTATGCGCCAGCATGGATTTCTTACTTGGGATGCCCGCATGAAGATTCTTCTCGGGACAGCTAAGGCTCTTGCCTACTTGCATGAGGCCATTGAGCCAAAAGTGGTGCACCGGGACATTAAATCAAGTAACATTTTGATTGATGATGATTTCAATGCCAAGGTTTCTGATTTCGGCCTGGCCAAGTTGTTGGGTGCTGGGAAAAGTCATATCACAACTCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTGAATGAAAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTTTGGAAGCAATTACTGGAAGAGATCCTGTGGACTATGGTCGCCCTGCCCAAGAGGTTAATCTGGTTGATTGGCTTAAAATGATGGTTGGAAGCAGGAGGTCAGAAGAAGTTGTAGACCCAAACATTGAGGTCAGACCATCTACAAGAGCCTTAAAACGAGCTCTTTTGACTGCTCTGAGATGTGTTGATCCAGATTCTGAGAAGAGACCCAAAATGGGCCAAGTTGTACGTATGCTCGAGTCTGAGGAATATCCCATACCAAGAGAGGATCGAAGGCACCGAAGAACTCAAGCAGGTAGCATGGAGATTGAGTCTCAGAAGGAGAATTCTGACACTGATCAGAGTGAAAATCTGGGTTCAAGGTCAGAGAGTAGAGGCTACCACAGGACATAA | 1536 | 43.55 | MTTDLNAELSKKTDVLGLKVWELIGIVVALFIIIILCVLSLCLTSRKKSRSSRDRLPVNQIPTVSKEIKEVRVEQVSTNEFVPRDGILLTIHDKSSDKESDKVLVHLGMGKTKNGDNSSQSGSFHHLEKDGCGSQSGEEGSSGTVTVYKPSSSYPITAPSPLVGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLINGTPVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVSNGNLEQWLHGAMRQHGFLTWDARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPIPREDRRHRRTQAGSMEIESQKENSDTDQSENLGSRSESRGYHRT* | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 432691 | 438118 | + | Vvi14g39 | Vvi14g39 | 775106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g39 | 511 | MobiDBLite | consensus disorder prediction | 110 | 146 | - | - | |
Vvi14g39 | 511 | CDD | STKc_IRAK | 195 | 461 | - | - | |
Vvi14g39 | 511 | MobiDBLite | consensus disorder prediction | 461 | 511 | - | - | |
Vvi14g39 | 511 | ProSiteProfiles | Protein kinase domain profile. | 189 | 453 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g39 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 311 | 323 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi14g39 | 511 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 2 | 510 | - | - | |
Vvi14g39 | 511 | PANTHER | OS01G0323000 PROTEIN | 2 | 510 | - | - | |
Vvi14g39 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 265 | 476 | - | - | |
Vvi14g39 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 171 | 264 | - | - | |
Vvi14g39 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 173 | 469 | IPR011009 | - | |
Vvi14g39 | 511 | ProSitePatterns | Protein kinases ATP-binding region signature. | 195 | 218 | IPR017441 | GO:0005524 | |
Vvi14g39 | 511 | Pfam | Protein kinase domain | 190 | 457 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g39 | 511 | MobiDBLite | consensus disorder prediction | 461 | 492 | - | - | |
Vvi14g39 | 511 | SMART | serkin_6 | 189 | 460 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76220 | PF00069 | Pkinase | 7.60E-48 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g39 | - | - | vvi:100261416 | 966.452 |