Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g419 ATGGGGTGTGTACTTGGTCGTGAAGTGTTGTCGAACGTGGTGGTTTCGGAGGCTAATGGGGCGGAGAAGAGTATCAAGGAGAAGAGGAGTAATTCGAGTGTCAATTCGAATAGGAAGTTGGATGATGTGACGAAGAAAAGTGATAGTAAGGTTGAGGTTGGTAACGGAGAGACCCAAAAGGAGGAGAAGACTGATGGTAGTCAACGGCCCCGAGGTGATAAGAAAAAATTGAGGTCAAATCCGAGGTTGAGTAATCTGCCCAATCATGTGCGTGGAGAGCAAGTTGCAGCTGGGTGGCCGTCTTGGTTATCGGATGTTGCAGGGCCAGCACTTAATGGCTGGATACCTCGGCGAGCAGACACTTTCCAGAAACTTGATAAGATTGGACAAGGAACATATAGCAATGTGTATAAAGCTAGAGATATGTTAACGGGCAAAATTGTTGCACTAAAGAAAGTTCGATTTGATAATTTGGAACCTGAGAGTGTGAAATTTATGGCTAGAGAGATTGTCATTTTGCGGCGCTTGGATCATCCCAATGTTGTAAAATTGGAGGGTTTGGTGACTTCAAGGCTGTCCTGCAGTTTGTATCTTGTATTTGAGTATATGGAGCATGATTTGGCTGGACTTGCTGCAAGCCCGGGTATCAAATTCACTGAACCTCAGGTCAAATGTTACATGAAACAACTACTATCTGGCCTAGAGCATTGTCACAACCGCGGTGTGCTTCACCGTGACATCAAAGGATCAAATCTCCTTCTTGATAATGGAGGAGTACTTAAGATTGCTGATTTTGGCTTGGCTGCTATATTTGATCCTAATTACAAGCACCCAATGACGAGTCGGGTGGTAACCTTATGGTATCGACCTCCAGAGCTTCTGCTTGGGGCTAATGACTATGGCGTCGGTGTGGACTTGTGGAGTGCAGGCTGCATTTTAGCTGAGTTATTGGCTGGGAAGCCCATCATGCCTGGTCGTACAGAGGTAGAGCAATTACATAAGATATACAAGCTATGTGGCTCACCTTCTGATGAATACTGGAAAAAATATAGATTGCCAAATGCAACCTTATTCAAGCCTCGAGAGCCTTACAAACGATGCATAGCAGAGACATTCAAAGACTTCCCACCATCTTCACTGCCACTTATTGAAACTCTTCTTGCAATTGATCCAGTGGAACGTCGGACAGCCACAGCTGCATTAAACTGTGAATTCTTCACAACGAAACCTTATGCTTGTGAACCATCTAGCCTTCCGCAATATCCTCCAAGCAAGGAGATGGATGCCAAGAGGCGAGATGATGAAGCTCGAAGGCAAAAAACCGCTAGCAAAGCCCACGGTGATGGTGCGAAGAAAATGCGTCCACGCGCTAGGGCAATGCCTGGACCAGAAGCCAATGCTGAGCTTCAATCTAATCTTGATCGAAGACGCCTAATCTCCCATGCAAATGCAAAGAGTAAGAGTGAAAAGTTTCCTCCACCTCACCAGGACGGAGCAGTTGGCTTCCCCTTGGGTGCTTCACAACACATTGATCCTGCTTTTGTCCCTGGTGATGTGCCATTCAGTTCTACATCATTTACATCTTCAAAAGATCATGCCCAGACCTGGTCCGGTCCAATAGGCGACCCTGCTGCCATTGGAGCTCTAAGGCGAAAGAAGAACACTTATGGTGATGCTCGAGAACCGAAAAAACCAGCAGCAGTTAACCCAAGGGACGGAAGTGCGAAGGTGAGGGTGGTTAAAGGATAG 1749 46.37 MGCVLGREVLSNVVVSEANGAEKSIKEKRSNSSVNSNRKLDDVTKKSDSKVEVGNGETQKEEKTDGSQRPRGDKKKLRSNPRLSNLPNHVRGEQVAAGWPSWLSDVAGPALNGWIPRRADTFQKLDKIGQGTYSNVYKARDMLTGKIVALKKVRFDNLEPESVKFMAREIVILRRLDHPNVVKLEGLVTSRLSCSLYLVFEYMEHDLAGLAASPGIKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLLDNGGVLKIADFGLAAIFDPNYKHPMTSRVVTLWYRPPELLLGANDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKYRLPNATLFKPREPYKRCIAETFKDFPPSSLPLIETLLAIDPVERRTATAALNCEFFTTKPYACEPSSLPQYPPSKEMDAKRRDDEARRQKTASKAHGDGAKKMRPRARAMPGPEANAELQSNLDRRRLISHANAKSKSEKFPPPHQDGAVGFPLGASQHIDPAFVPGDVPFSSTSFTSSKDHAQTWSGPIGDPAAIGALRRKKNTYGDAREPKKPAAVNPRDGSAKVRVVKG* 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5779876 5786948 - Vvi14g419 Vvi14g419 775486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g419 582 MobiDBLite consensus disorder prediction 525 582 - -
Vvi14g419 582 SUPERFAMILY Protein kinase-like (PK-like) 116 411 IPR011009 -
Vvi14g419 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Vvi14g419 582 Gene3D Transferase(Phosphotransferase) domain 1 205 446 - -
Vvi14g419 582 MobiDBLite consensus disorder prediction 425 458 - -
Vvi14g419 582 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Vvi14g419 582 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g419 582 MobiDBLite consensus disorder prediction 21 80 - -
Vvi14g419 582 MobiDBLite consensus disorder prediction 553 567 - -
Vvi14g419 582 Gene3D Phosphorylase Kinase; domain 1 110 204 - -
Vvi14g419 582 MobiDBLite consensus disorder prediction 416 474 - -
Vvi14g419 582 CDD STKc_CDK9_like 122 406 - -
Vvi14g419 582 PANTHER CELL DIVISION PROTEIN KINASE 52 555 - -
Vvi14g419 582 PANTHER OS01G0367700 PROTEIN 52 555 - -
Vvi14g419 582 MobiDBLite consensus disorder prediction 17 90 - -
Vvi14g419 582 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g419 582 SMART serkin_6 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g361 Vvi14g419 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76221 PF00069 Pkinase 2.10E-67 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g419 K08819 - vvi:100253772 1176.39