Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g42 ATGCCAACCTTGCTCTTTTGCATCATGTTCTTTCTCACTGTATCAGTCTCATCTGCATCTCTTAAAGTAGGCTTCTACAAATATACTTGCCCTTCTGCTGAGACAATTGTGAGGAAAGTAGTGAACAAGGCTGTGTCGCAGAATCCTGGCATGGCTGCTGGCCTCATTAGGATGCATTTCCATGACTGCTTTGTTAGGGGTTGTGATGGCTCGGTCCTACTTGATTCAACGCCTGGAAATCCATCGGAAAAGGAAAATCCAGCAAATAATCCAAGCTTGAGAGGTTTTGAGGTGATTGATGCTGCAAAGGCTGAAATTGAAGCTCAATGCCCACAAACTGTGTCTTGTGCAGATGTCCTTGCATTTGCCGCACGTGACAGTGCCTACAAGGTTGGAGGAATCAACTATGCCGTGCCATCAGGACGTCGCGATGGAAGAGTATCACTGAAAGATGAGCCTTCCCTACACCTGCCCCCTCCTTTCTTCAATGCCAAACAGCTTGAGGATAATTTTGCACGAAAGGGCCTCACTCTTGATGAAATGGTGACACTCTCTGGGGCACATTCTATAGGGGTACACTTGAAAACCAAGTGTCCCCCGCCATCAAACACAGGCAGTGATCCAACAAAATATTCAGATAAACGCAAAGAAAATTTAATCTCTTCTCTCTCACAATCATATACAATGATGGGTTCTCTGGGTGGTAGTGAGAAAATGCCAACCTTTTTCTTTTGCATCATGTTGTTTCTCACTGCATCAGTCTCATCAGCATCCCTTGAAGTGGGGTTCTACAAATCTAGTTGCCCTTCTGCTGAGACAATTGTGAGAAAAGCAGTAAACAAAGCTGTGTCAAAGAATCCCGGCATGGCTGCTGGCCTCATTAGAATGCATTTCCATGACTGCTTTGTTAGGGGTTGTGATGGCTCGGTCCTACTTGATTCAACGCCTGGCAATCCATCAGAAAAAGAAAGTCCAGTAAATGATCCAAGCTTGCGGGGTTTTGAGGTGATTGATGAGGCAAAGGCTGAAATTGAAGCTCAATGCCCACAAACTGTGTCTTGTGCAGATGTCCTTGCATTTGCTGCCCGAGACAGCGCCTACAAGGTTGGAGGAATCAACTATGCTGTGCCATCAGGACGCCGTGATGGAAGAATATCACTGAAAGATGAGCCTTCCCTACACCTGCCTCCTCCTTTCTTCAATGCCAAACAGCTTGAGGAAAATTTTGCCCGAAAAGGCCTTACTCTTGATGAAATGGTGACACTCTCTGGGGCACATTCTATTGGAGTGTCACATTGTTCTTCCTTCTCAAACCGCCTCTACTCTTTCAATGCCACTCACCCTCAAGATCCTTCTATAGAGCCTGAATTTGCTAGACACCTAAAAACCAAGTGTCCCCCACCATCAAATACGGGCAGTGATCCAACAGTGCCGCTTGAGGTTCAGACACCCAATAGGCTGGACAACAAGTACTATAAAGATTTGAAGAGCCGCAAGGGCTTATTGACATCAGATCAGACTCTTTTTGATAGCCCTTCAACGGTGAGGATGGTGAAGAATAATGCAAGGTATGGTGCAAATTGGGGTAATAAGTTTGCAGCAGCAATGGTTCAAATGGGCGCCATTGATGTTCTCACAGGGACCCAAGGTGTGATCAGGAAGAATTGTAGAGTTAAGATGGGTTGTTTAAAGCTTAGGTGTTGGGTGACCATGGTGCTAGTGATGGCTGCAGTGGTGCATGGTGAAAATGAGGGAGGTGGCATGACAGATGGAGCTGACCATGGGCTCAATGAAAAGAAAACAGAAGATGTAAAGCAAGTGCAAACAATTGGGTCTCTTTTTCCAGGTGGAGGCAGCACAGGGCCAGGCATTGGTGTTGTTATACAGCCAGGCATTGGTGGTGGAAGCCTACCACCCTTTAGCAGGAGACCACCCGGTGGAGGTGGAATTGGGCCTGGCTATGGTGGTGGAACCGGGGCAGGACTTGGGGGTAGAACTAGACCCGGGAATGGTGGTGTAACAGGGCCTGGACTTGGCAGATTTGGGCGCCGGTATGGTGGGGGAAATGGGCCTAGGTATGGCGGTGGAATTGGGTCTGGACCGGGCGGTGGCCGTCCTGGTACTGGGCCTGGATCCGGGTACGGGGGTGGAGGGCCAGGTGGATATGACTATGATCCTGATTATGGTAGCCCTGGCGGATCAGATTATGAACCCGGCTATGGTTCGCCGGGCTATGGTGGGCCTGGTGATGGGTTTAACGGTGGAGATGACCCGGGTTACGATGGAGGCGGGTATGGGCCGGGTTATGGAGGGAGAGGGAACTCACATGGCAGAGTTTTTGCATTGGAAGTTAAAGTTGAAGGAGGGAGGATTCTCAAGAGCAAGGGTGATGATCAGGTTGCCCACCCTCAAAACTTCTTTGCAGGGTTTGGCACCTTCCCAACTCCAGGCTTGGCTGCAGGCGTTGGGTTTGGCCCATCAGGGTTCTGCTCCTTCCCAGGGATCGGATGTGTCCGCGTCCAACCCACCAACCCTGGTGGATCTGTTGGTGGTGGCTTACCCATTCCATGA 2571 49.36 MPTLLFCIMFFLTVSVSSASLKVGFYKYTCPSAETIVRKVVNKAVSQNPGMAAGLIRMHFHDCFVRGCDGSVLLDSTPGNPSEKENPANNPSLRGFEVIDAAKAEIEAQCPQTVSCADVLAFAARDSAYKVGGINYAVPSGRRDGRVSLKDEPSLHLPPPFFNAKQLEDNFARKGLTLDEMVTLSGAHSIGVHLKTKCPPPSNTGSDPTKYSDKRKENLISSLSQSYTMMGSLGGSEKMPTFFFCIMLFLTASVSSASLEVGFYKSSCPSAETIVRKAVNKAVSKNPGMAAGLIRMHFHDCFVRGCDGSVLLDSTPGNPSEKESPVNDPSLRGFEVIDEAKAEIEAQCPQTVSCADVLAFAARDSAYKVGGINYAVPSGRRDGRISLKDEPSLHLPPPFFNAKQLEENFARKGLTLDEMVTLSGAHSIGVSHCSSFSNRLYSFNATHPQDPSIEPEFARHLKTKCPPPSNTGSDPTVPLEVQTPNRLDNKYYKDLKSRKGLLTSDQTLFDSPSTVRMVKNNARYGANWGNKFAAAMVQMGAIDVLTGTQGVIRKNCRVKMGCLKLRCWVTMVLVMAAVVHGENEGGGMTDGADHGLNEKKTEDVKQVQTIGSLFPGGGSTGPGIGVVIQPGIGGGSLPPFSRRPPGGGGIGPGYGGGTGAGLGGRTRPGNGGVTGPGLGRFGRRYGGGNGPRYGGGIGSGPGGGRPGTGPGSGYGGGGPGGYDYDPDYGSPGGSDYEPGYGSPGYGGPGDGFNGGDDPGYDGGGYGPGYGGRGNSHGRVFALEVKVEGGRILKSKGDDQVAHPQNFFAGFGTFPTPGLAAGVGFGPSGFCSFPGIGCVRVQPTNPGGSVGGGLPIP* 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 456871 466070 - Vvi14g42 Vvi14g42 775109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g42 856 PANTHER PEROXIDASE 25-RELATED 247 558 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 MobiDBLite consensus disorder prediction 193 214 - -
Vvi14g42 856 PANTHER PEROXIDASE 247 558 - -
Vvi14g42 856 SUPERFAMILY Heme-dependent peroxidases 21 203 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PANTHER PEROXIDASE 10 193 - -
Vvi14g42 856 PRINTS Plant peroxidase signature 332 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 351 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 534 547 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 478 493 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 494 511 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 292 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 268 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 370 385 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Plant peroxidase signature 417 429 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 ProSiteProfiles Plant heme peroxidase family profile. 20 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 CDD secretory_peroxidase 259 558 IPR033905 GO:0004601|GO:0042744
Vvi14g42 856 Gene3D - 262 558 - -
Vvi14g42 856 ProSitePatterns Peroxidases proximal heme-ligand signature. 418 428 IPR019793 -
Vvi14g42 856 Pfam Peroxidase 37 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 Pfam Peroxidase 275 522 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vvi14g42 856 PRINTS Haem peroxidase superfamily signature 290 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Haem peroxidase superfamily signature 352 369 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Haem peroxidase superfamily signature 370 382 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Haem peroxidase superfamily signature 480 495 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PRINTS Haem peroxidase superfamily signature 418 433 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 ProSitePatterns Peroxidases active site signature. 290 301 IPR019794 GO:0004601
Vvi14g42 856 CDD secretory_peroxidase 21 205 IPR033905 GO:0004601|GO:0042744
Vvi14g42 856 Gene3D Peroxidase, domain 2 396 539 - -
Vvi14g42 856 Gene3D Peroxidase, domain 2 163 230 - -
Vvi14g42 856 SUPERFAMILY Heme-dependent peroxidases 259 558 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 MobiDBLite consensus disorder prediction 638 768 - -
Vvi14g42 856 Gene3D - 20 162 - -
Vvi14g42 856 ProSiteProfiles Plant heme peroxidase family profile. 258 560 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g42 856 PANTHER PEROXIDASE 25-RELATED 10 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g42 K00430 - vvi:104881373 670.233