Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g434 ATGAAGCACATTTTCAAGAAGCTTCATATAGGGAGTAGCAGTCACGATCCCAATCGATCCAACGAAACCCTAAGCTCCGCCACTACATCATCGCCCGCCTGTGCTTCCGATCATCGGACATCTTCCGCGCAGTCTTCGGTGAGCCCTCCCTCCTCCTATCCTTCTCCGACTACTGTATCCTCCACCGCCGCCTCCACCCTCCCCACCGCCACCTCTCCGGCGGCATCGAATCGGTCGGACTATTTCTTGTCCGAAGAGGAGTTTCAGGTCCAACTTGCTCTTGCTATCAGCGCTTCCAATTCGGACTTCCGTGATGATTCGGAGAAGGATCAGATCCGCGCCGCGACGTTGCTCAGCTTGGGTCGCCACCGAACTGATTCGGTCCGCGATAAGGATGAATCGGCGGAGTCTATGTCGCGCCGATATTGGGATTACAATGTGCTTGACTATGAAGAGAAAGTGGTAGATGGGTTTTATGATGTGTATGGGCTCTCCACAGATCCAGTAATCCAAGGGAAAATGCCATCTCTCACAGATCTTGAAACAAACCTTGGAAACTCTGGATTTGAAGTGATTGTAGTTAACCGCAGAATTGACCCTGCCCTGGAAGAGTTGGTGCAAGTCGCACACTGTATTGCCTTAGACTGCCCTGCTGCTGAGGTTGGTGTTTTGGTGCAGAGGCTTGCTGAGATTGTTACAGATCACATGGGTGGGCCAGTAAGGGATGCTAATATTATGTTGGTGAAGTGGATGGAAAGCAGAAAAGATTTGAGGACATCTCTTCACACAAGCATTTTGCCTGTTGGGTCCTTAAGTATTGGCCTTTCACGTCACCGTGCTTTGCTTTTCAAGATATTAGCTGACAATGTTGGTGTACCATGTCGACTGGTAAAAGGTAGTCATTACACTGGCGTAGAGGATGATGCTGTCAACATAATAAAATTGGATAATGAAAGGGAGTTTTTGGTTGATCTCATGGGAGCCCCTGGGACACTTATTCCAGCTGACATTCTTAGTGCAAAGGATAGCAGTAGTCAAACCTCCACAATTGAAAATAGTTTGCCTCAGGATAGGAAAGCAAGTTCTGAAAAGATAGAATCCTTGGATTCATTTTCTAGTTCAAGTGGTGACACTGGTGTTGGTACTTCCAGAATTTCTAAAAGAGTGACTCCTGTTAATCAGTCAGATCTTCGGCCTTCATTGGCAATTGGGGCCTCTGTGTATAAAGGGAGTCGTGGTGCCAATGCAGTTGGTGATGGTTCGAGGATGAATGTTAACATAGTTCCATATAATCAAAACAGCACAGAAGACCCTAAAAACCTTTTTGCAGATCTTAATCCTTTCCAGATGATAGGATCCAGCAAGGCTTCTGCACAGAGCAAACCTATGGAGAATAAAGTTGATGAGTTTCAAAGAGAGAAAAATAGCGCTGCCCCTGTTAATGATGACCAAAATTCTTCTTGTAATACCACTTCAATGTTGGCACCAAGCACAAGTCAGTTCAATAGGTTATCTTTGGATGAGGATGTAAATGCTAATTACAATGAAAAATATCACAAGGATGGGAAAGTTTTTCAAAGTGACATGGTAGATGCTGCAAAAGAACATGACAAGAATGAAACTGGTCTGCATGATCACAGAAAGTTCAGACATGATAGCTTTATGGAGAACAATTTGAGGGAAGCTGAAAGTCCTTGCTCGTCTGTTGACAGTGATGCTGGTAAAGTTGATCAAATGTTTGAAGATGTAGGTGAATGCGAAATTCCTTGGGAAGACCTGGTTCTTGGGGAAAGGATTGGACTAGGCTCGTATGGAGAGGTCTACCATGGTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAGTTCTTGGACCAGGATTTCTCAGGTGCTGCTTTGGCCGAGTTCAAAAGAGAAGTGCGAATAATGCGTAGATTACGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGCCCTCCAAACCTCTCTATCATCACTGAGTTTCTTCCAAGAGGAAGCTTATATCGGATTCTTCATCGTCCTTCTTGTCAAATTGATGAGAAGCGTAGAATTAAAATGGCTCTTGATGTGGCAAAGGGTATGAATTGTTTGCACACCAGTTTACCAACAATTGTTCACCGGGATTTGAAGTCACCAAATCTGCTGGTTGATAAGAACTGGAATGTCAAGGTATGTGATTTTGGGTTGTCACGCCTGAAGCACAACACATTTTTGTCATCCAAATCAACTGCTGGAACGCCTGAGTGGATGGCCCCAGAAGTTCTCCGCAATGAAAATTCAAATGAGAAGTGTGATGTCTATAGCTTTGGAATCATTCTGTGGGAGCTTGCAACTTTAAGGTTGCCTTGGAGTGGGATGAATCCAATGCAAGTTGTGGGAGCAGTAGGTTTCCAGAACCGTCGTCTTGACATACCAAAGGAAGTTGATCCCTTGGTTGCAAGGATAATCTGGGAATGCTGGCAGACGGATCCGAACTTGCGCCCATCGTTTGCACAGCTGACAGTAGCTCTGAAGCCCTTACAGCGACTGGTGATCCCTCAACATTTGGACCAGCAAAGCCTGACCCTCCAGCAAGAGATCTCAGATGAAGTTAGATTGTGCGATTAA 2631 45.27 MKHIFKKLHIGSSSHDPNRSNETLSSATTSSPACASDHRTSSAQSSVSPPSSYPSPTTVSSTAASTLPTATSPAASNRSDYFLSEEEFQVQLALAISASNSDFRDDSEKDQIRAATLLSLGRHRTDSVRDKDESAESMSRRYWDYNVLDYEEKVVDGFYDVYGLSTDPVIQGKMPSLTDLETNLGNSGFEVIVVNRRIDPALEELVQVAHCIALDCPAAEVGVLVQRLAEIVTDHMGGPVRDANIMLVKWMESRKDLRTSLHTSILPVGSLSIGLSRHRALLFKILADNVGVPCRLVKGSHYTGVEDDAVNIIKLDNEREFLVDLMGAPGTLIPADILSAKDSSSQTSTIENSLPQDRKASSEKIESLDSFSSSSGDTGVGTSRISKRVTPVNQSDLRPSLAIGASVYKGSRGANAVGDGSRMNVNIVPYNQNSTEDPKNLFADLNPFQMIGSSKASAQSKPMENKVDEFQREKNSAAPVNDDQNSSCNTTSMLAPSTSQFNRLSLDEDVNANYNEKYHKDGKVFQSDMVDAAKEHDKNETGLHDHRKFRHDSFMENNLREAESPCSSVDSDAGKVDQMFEDVGECEIPWEDLVLGERIGLGSYGEVYHGDWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPSCQIDEKRRIKMALDVAKGMNCLHTSLPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNENSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQTDPNLRPSFAQLTVALKPLQRLVIPQHLDQQSLTLQQEISDEVRLCD* 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6026346 6048725 - Vvi14g434 Vvi14g434 775501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g434 876 Pfam Protein tyrosine and serine/threonine kinase 594 843 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 PRINTS Tyrosine kinase catalytic domain signature 667 680 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 PRINTS Tyrosine kinase catalytic domain signature 706 724 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 PRINTS Tyrosine kinase catalytic domain signature 753 763 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 PRINTS Tyrosine kinase catalytic domain signature 772 794 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 PRINTS Tyrosine kinase catalytic domain signature 816 838 IPR001245 GO:0004672|GO:0006468
Vvi14g434 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Vvi14g434 876 MobiDBLite consensus disorder prediction 14 75 - -
Vvi14g434 876 SMART serkin_6 593 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g434 876 SUPERFAMILY Protein kinase-like (PK-like) 578 841 IPR011009 -
Vvi14g434 876 MobiDBLite consensus disorder prediction 1 75 - -
Vvi14g434 876 MobiDBLite consensus disorder prediction 477 494 - -
Vvi14g434 876 CDD STKc_MAP3K-like 599 842 - -
Vvi14g434 876 Pfam Ethylene-responsive protein kinase Le-CTR1 135 333 - -
Vvi14g434 876 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 481 866 - -
Vvi14g434 876 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 73 346 - -
Vvi14g434 876 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 342 478 - -
Vvi14g434 876 Gene3D Phosphorylase Kinase; domain 1 586 670 - -
Vvi14g434 876 Gene3D Transferase(Phosphotransferase) domain 1 672 854 - -
Vvi14g434 876 MobiDBLite consensus disorder prediction 344 394 - -
Vvi14g434 876 MobiDBLite consensus disorder prediction 366 394 - -
Vvi14g434 876 ProSiteProfiles Protein kinase domain profile. 593 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g434 876 PANTHER SERINE-THREONINE PROTEIN KINASE 481 866 - -
Vvi14g434 876 PANTHER SERINE-THREONINE PROTEIN KINASE 73 346 - -
Vvi14g434 876 PANTHER SERINE-THREONINE PROTEIN KINASE 342 478 - -
Vvi14g434 876 MobiDBLite consensus disorder prediction 471 494 - -
Vvi14g434 876 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76222 PF07714 PK_Tyr_Ser-Thr 1.20E-63 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g434 - - vvi:100262285 1427.92