Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g496 ATGATCTTGTTGGGGCTAGTAGGCTTGAAGGACCCGTGTCGACCAGGAGTAAGAAGAGCAGTAGAAGTTTGTAGGGATGCTGGAGTGAACGTTAAAATGATCACTGGAGACAACATTTTCACTGCAAAAGCAATAGCTATGGAATGTGGGATTCTCAAACCTGATGAGGATTTCAACAATGCACTTTTGATGGTGCAGAGCTTGAAGAAGAAAGGCCATGTGGTAGCAGTCACAGGTGATGGCACCAATGATGCCCCTGCTCTAAAAGAAGCAGACATTGGGCTCTCCATGGGAATTCAAGGCACAGAAGTTGCAAAAGAGAGCTCAGACATTGTCATCCTGGATGACAACTTCACTTCTGTGGTGACAGTTATGAAATGGGGAAGATGTGTATATAATAACCTTCAAAAGTTCATCCAGTTTCAACTCACAATCAATGTTGCTGCCCTGGGCATCAATTTTGTTGCTGCACTTTAG 477 44.03 MILLGLVGLKDPCRPGVRRAVEVCRDAGVNVKMITGDNIFTAKAIAMECGILKPDEDFNNALLMVQSLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVYNNLQKFIQFQLTINVAALGINFVAAL* 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7174321 7174970 - Vvi14g496 Vvi14g496 775563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g496 158 PANTHER CATION TRANSPORTING ATPASE 2 60 - -
Vvi14g496 158 PANTHER CATION TRANSPORTING ATPASE 62 157 - -
Vvi14g496 158 Gene3D - 124 157 - -
Vvi14g496 158 Gene3D - 1 12 IPR023299 GO:0000166
Vvi14g496 158 PRINTS H+-transporting ATPase (proton pump) signature 78 94 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi14g496 158 PRINTS H+-transporting ATPase (proton pump) signature 110 135 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi14g496 158 Pfam haloacid dehalogenase-like hydrolase 4 92 - -
Vvi14g496 158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 2 156 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi14g496 158 Gene3D - 13 59 IPR023214 -
Vvi14g496 158 Gene3D - 62 123 IPR023214 -
Vvi14g496 158 SUPERFAMILY HAD-like 3 153 IPR036412 -
Vvi14g496 158 PANTHER CALCIUM-TRANSPORTING ATPASE 2 60 - -
Vvi14g496 158 PANTHER CALCIUM-TRANSPORTING ATPASE 62 157 - -
Vvi14g496 158 PRINTS P-type cation-transporting ATPase superfamily signature 5 16 - -
Vvi14g496 158 PRINTS P-type cation-transporting ATPase superfamily signature 27 37 - -
Vvi14g496 158 PRINTS P-type cation-transporting ATPase superfamily signature 78 97 - -
Vvi14g496 158 PRINTS P-type cation-transporting ATPase superfamily signature 102 114 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g570 Vvi14g496 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g496 K01537 - csin:114309782 256.914