Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g507 ATGGGTATGCCTTTGGGGTTGAATTTGGAACATGGGTTTTTGAAAGCCAGGGATCAAAGTGGTGCTACCAATAATGCTGCTGCTGCTGCTTCTTCTTCATGTGGAATCACTGAGAGAGAATCGGTGCATCTGACAAACTTGTTTCCAGCTTTTGGACAGTTGCAGCCACAGTCACTCCGCCCTTCACCACCAGCCCCTGCTCCTCCTCCCCCACACCTTCCTCAGCCTTTTCATGGCCAACCAACTTCTAGTGCAGTTGCTGCTCAACCACATCCTCCTGCCATCCGCCCTAGGGTGCGAGCAAGACGAGGGCAAGCCACAGATCCCCACAGTATTGCTGAGAGGTTACGTAGAGAAAGGATAGCAGAGAGAATGAAGGCTTTGCAGGAATTGGTTCCTAGTGCCAACAAGACTGATAGAGCGGCTATGCTTGATGAAATTGTGGATTATGTGAAGTTTTTACGGCTTCAAGTCAAGGTTTTGAGCATGAGCAGACTTGGTGGAGCAGGTGCAGTAGCCCAGCTGGTAGCTGATGTTCCCTTGTTATCAATTGAGGGAGATGGCACTGAGGGTGGAAGCAATCAGCAAGCTTGGGAGAAGTGGTCAACAGATGGAACAGAACAACAAGTAGCTAAGCTGATGGAAGAAGATGTGGGAGCTGCCATGCAGTTCCTTCAGTCCAAGGCACTTTGCATCATGCCTATCTCACTGGCCTCGGCAATCTTCCGGACACACCAACCTGAACCATCAACACTAGTCAAGCCTGAATCCGATGCTCCCTCATAG 786 50.25 MGMPLGLNLEHGFLKARDQSGATNNAAAAASSSCGITERESVHLTNLFPAFGQLQPQSLRPSPPAPAPPPPHLPQPFHGQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQPEPSTLVKPESDAPS* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7430387 7436427 + Vvi14g507 Vvi14g507 775574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g507 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 154 IPR011598 GO:0046983
Vvi14g507 261 MobiDBLite consensus disorder prediction 59 77 - -
Vvi14g507 261 Pfam Helix-loop-helix DNA-binding domain 110 154 IPR011598 GO:0046983
Vvi14g507 261 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 249 - -
Vvi14g507 261 MobiDBLite consensus disorder prediction 54 110 - -
Vvi14g507 261 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 3 249 - -
Vvi14g507 261 SMART finulus 111 160 IPR011598 GO:0046983
Vvi14g507 261 Gene3D - 100 162 IPR036638 GO:0046983
Vvi14g507 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 164 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g9 Vvi14g507 ECH
Vvi5g598 Vvi14g507 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14003 PF00010 HLH 6.20E-08 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g507 - - vvi:100262267 435.261