Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi14g525 | ATGCGTGTGATCCACAAAGTAGCCACCTTTCTAGAGAAAATTCTCCATCTCCACAAATCAATCGTCGTCTCCTTTTATATGCTATGTGGCACTGCAGTGAACATTATTGTAGGTTCTCAAGTCTGGGTTGAAGACCCAGAAGCAGCTTGGATTGATGGACTGGTAACAAAAATCAATGGAGCAGAAGCTGAAATAGAGCTTACTAAGGGAAAGAAGGTTGTTGTGAATTTATTGAAAATATATCCAAAGGATACGGAAGCTCCTGCTGGTGGAGTTGATGACATGACAAAGCTATCTTATTTGCATGAACCTGGAGTTTTACAAAACTTGAAATCTAGATATGAGCTCAATGAGATATATACTTATACTGGAAACATACTTATCGCAATTAATCCTTTCCAAAGATTGCCTCATATTTATGATGCTCACATGATGCAACAATACAAGGGGGCACCTTTTGGAGAACTAAGTCCTCATGTTTTTGCAGTTGCTGATGTTGCATACAGGGCAATGATCAATGAAGGAAAAAGCAATTCAATTCTAGTCAGTGGTGAAAGTGGAGCAGGTAAAACTGAGACAACCAAAATGCTTATGCGGTACCTTGCCTTTCTGGGTGGTCGGGTGGCTACCGAAGGACGCACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACTGTTAGAAATAATAATTCCAGCCGCTTTGGTAAATTTGTTGAGATCCAGTTTGATAAGCAAGGAAGAATATCTGGAGCGGCCATCAGAACTTATCTTCTAGAGAGATCTCGTGTGTGCCAAATTTCTGATCCTGAACGCAATTACCACTGCTTCTACCTTCTTTGTGCAGCACCACAGGAGGAAATTGAGAAATACAAGCTAGGAAACCCCAAATCATTTCACTATCTGAACCAGTCAAATTGCTATGAACTGGTTGGTGTGAGTGATGCCCACGACTATCTTGCCACTAGGAGAGCTATGGATATTGTTGGAATAAGTGAAAAGGAACAGGAAGCAATCTTCAGAGTTGTTGCTTCAATTCTCCATATCGGCAACATTGAATTTACTAAGGGAAAGGAAGTTGATTCTTCAGTTCCAAAAGATGACAAGGCAAAATTCCATCTTAAAATGACAGCAGAGCTTCTAATGTGTGACCCTCTGGCCTTGGAAGATGCATTATGTAAACGTGTCATGATCACCCCCGAAGAAGTTATAAAGCGAAGTCTTGATCCTCTTGCTGCAACAGTTAGCAGGGATGGTTTTGCTAAGACAATATATTCTCGATTGTTTGACTGGTTGGTGGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCAAAATCTCTTATTGGGGTCCTTGACATCTACGGTTTTGAAAGCTTTAAGACTAACAGTTTTGAGCAATTCTGCATTAATTTCACAAATGAGAAGCTGCAGCAACATTTTAACCAGCATGTCTTCAAGATGGAACAAGAAGAATATACAAAAGAAGAAATTGATTGGAGCTACATTGAATTTGTTGATAATCAAGATGTCCTGGATCTCATTGAAAAGAAACCCGGTGGAATCGTTGCTCTCCTAGATGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTCTCACAGAAGCTTTATCAGACATTTAAAGTTCACAAGCGCTTTATCAAGCCAAAACTATCTCGCACAGATTTCACTATTTCTCATTATGCTGGGGAGGTCCTATATCAATCTGACCAATTTTTAGACAAAAACAAAGACTATGTGGTTCCAGAACATCAAGACTTGTTGGGTGCTTCTAAATGTACTTTTGTAGCAGGCCTTTTCCCTCCACTCCCTGAAGAGTCTGCCAAATCTTCTAAGTTCTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAGCAATTGATGGACACATTAAACTCCACAGAACCTCACTACATCAGATGTGTAAAGCCAAACAACCTTCTAAAACCTGCCATATTTGAGAATGTCAATATCATGCAACAACTACGTTGTGGTGGTGTTTTAGAGGCCATCAGAATCAGTTGTGCTGGGTATCCTACACGCCGTCCTTTTTTTGAATTCCTAAATCGATTTGGAATTCTTGCTCAAGAAGTTTTAGAAGGGAACTATGATGAAAAGGTTGCATGCAGAAAGATTCTGGAGAAAAAGGGGCTTAAGGGGTTTCAGATAGGTAAGACAAAGGTTTTCTTACGCGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCAGAGGTACTTAGTAATGCAGCAAAGGCTATCCAAAGGCGTATACGGACTTATCATGCTCGCAAACGTTTTATTGCATTGCGAAAGGCTACCATTCATGTGCAATCTTTATGGAGAGGAATGCTGGCTTGCAAACTTTATGAGAGCATGAGAAGAGAGGCTGCTGCTGTGAAAATTCAGAAGAACATACGTAGACATGAAGCCAGAAAAACCTTTAACAAGCTTCGAGTATCAGTGCTTGTCTTGCAGACAGGCTTAAGAGCAATGGCTGCTCATAGAGAATTCAGATTTAGGAAGCAAACTAAAGCAGCAATTGTTATTCAGGCCCGGTGGCGCTGTCATAGAGCTTTCTCATTCTACAAGAAGCTCAAGAGAGGAGCAATAGTTTCACAATGCAGATGGAGGGGAAGAGTAGCCAAGAAAGAGCTCAGGAAGCTGAAAATGGCTGCAAGAGAAACAGGTGCACTTAAAGAAGCGAAGGACAAGCTCGAAAAAACAGTGGAGGATTTAACATGGCGTCTACAGTTGGAAAAGCGTTTAAGGACTGACTTAGAAGAAGCAAAAGCACAGGAGATAGCAAAATTGCAGAATTCTTTGCAAGCTATGCAAACCAAAGTTGATGAAACAAATGCATTACTTGTCAAGGAACGAGAGGCTGCAAGAAAGGCTATTGAAGAGGCACCACCTGTTATTAAAGAAACCCCAGTTATTGTTGAAGATACCAAAAAAGTTGAGTCTCTAACAGCAGAAGTGGAGAGCTTCAAGGCCTTGTTGCAGTCAGAAAAAGAAAGAGCTGACAATTCTGAGAAGAAATATACTGAAGCCCAAGAATCTAGTGAAGAAAGACATAAAAAATTAGAAGAAACAGAAAAAAAGGTTCAGCAACTCCAGGAATCATTGAGCAGTGTAAAGTCAGACAAAGTGTCAAATGATCATGACAGCAATCAAATCTCTGTAAGGAAGATTGTTAAACCGACCACATTCTCAAATGTATGGTTCGCTATTCCAATTGAAAGTTCTCATAATCAGCTACTGGATAGATCAATTGACCAGTTGCTGGACTACAGCTATAAATGCAAAAAGTGCTTGAAGAAACAAATTAATCTGCATTTACATTTAATGCTAGAGGAGAAGCTTACTAATTTAGAATCAGAAAATCAAGTTCTCCGTCAACAGGCTGTGTCCATGGCACCCAATAAGTTTCTTTCAGGACGCTCCAAATCAATTGTTCAGAGGAGTTCTGAAGGTGGTCATGTTGCAGGGGATGCAAGGACTTCTTTGGATCTGCATAGCCCTTCACTAAACCAAAGGGAGTTTTCTGAAGTAGAGGAGAAACCACAAAAATCACTCAATGAGAAGCAGCAGGAGAATCAGGAACTGCTCATTCGATGCATTGCACAACACTTAGGCTTTGCAGGAAGTAGACCAATTGCTGCCTGTATCATATACAAATGCCTCCTGCAATGGAGATCATTTGAAGTTGAACGGACTAGTGTTTTTGACCGGATTATCCAGACAATAGGCCAGGCTATTGAGACCCAGGATAACAATGACATTTTGGCCTACTGGTTATCCAATGCCTCAACTCTTCTGTTACTACTCCAGCGCACATTGAAAGCAAGTGGTGCAGCTGGAATGGCTCCACAGCGCCGTCGATCATCATCAGCTACATTGTTTGGAAGGATGACACAGAGTTTTCGTGGAGCTCCACAAGGAGTTAATCTTTCCTTCACAAATGGTGGTCTAACCGGTGGAGTGGAAACTTTACGCCAAGTTGAAGCCAAATACCCAGCGCTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAGAAAATTTATGGAATGATTCGTGATAATCTGAAGAAAGAGATTTCTCCTTTACTGGGGTTGTGCATCCAGGCACCAAGAATATCAAGAGCAAGCTTAGTTAAGGGACCGTCACGTTCTGTTGCAAACACTGCAGCTCAACAAGCTTTGATTGCTCATTGGCAAGGGATTGTGAAGAGCCTTGGAAATTTCTTGAATACTTTGAAAGCAAATCATGTACCCCCATTTTTAGTTCGTAAGGTGTTCACACAAATATTTTCTTTCATCAATGTCCAATTATTCAACAGCCTTCTATTACGACGAGAGTGCTGTTCATTTAGTAATGGTGAATATGTTAAAGCAGGACTGGCTGAACTGGAACATTGGTGTTACAAGGCAACCGATGAGTATGCAGGTTCAGCTTGGGATGAGCTCAAGCATATCAGGCAGGCTATTGGGTTTCTGGTCATACATCAAAAGCCAAAGAAAACCCTTGATGAAATAAGCCATGACCTATGCCCGGTGCTCAGTATACAGCAGCTGTATCGGATCAGTACAATGTACTGGGATGACAAGTATGGCACGCATAGTGTGTCCCCAGATGTTATATCCAACATGAGGGTGTTGATGACTGAAGATTCGAACAATGCAGTCAGCAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCAGTTGATGATATATCAAAGTCTATGGAACAAATAGACATATCTGACATTGAACCACCACCACTTATTCGTGAGAATTCTGGCTTTAGTTTCTTGTTGCCGCGTGCTGATTAA | 4893 | 40.81 | MRVIHKVATFLEKILHLHKSIVVSFYMLCGTAVNIIVGSQVWVEDPEAAWIDGLVTKINGAEAEIELTKGKKVVVNLLKIYPKDTEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPQEEIEKYKLGNPKSFHYLNQSNCYELVGVSDAHDYLATRRAMDIVGISEKEQEAIFRVVASILHIGNIEFTKGKEVDSSVPKDDKAKFHLKMTAELLMCDPLALEDALCKRVMITPEEVIKRSLDPLAATVSRDGFAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSQKLYQTFKVHKRFIKPKLSRTDFTISHYAGEVLYQSDQFLDKNKDYVVPEHQDLLGASKCTFVAGLFPPLPEESAKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFLNRFGILAQEVLEGNYDEKVACRKILEKKGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKAIQRRIRTYHARKRFIALRKATIHVQSLWRGMLACKLYESMRREAAAVKIQKNIRRHEARKTFNKLRVSVLVLQTGLRAMAAHREFRFRKQTKAAIVIQARWRCHRAFSFYKKLKRGAIVSQCRWRGRVAKKELRKLKMAARETGALKEAKDKLEKTVEDLTWRLQLEKRLRTDLEEAKAQEIAKLQNSLQAMQTKVDETNALLVKEREAARKAIEEAPPVIKETPVIVEDTKKVESLTAEVESFKALLQSEKERADNSEKKYTEAQESSEERHKKLEETEKKVQQLQESLSSVKSDKVSNDHDSNQISVRKIVKPTTFSNVWFAIPIESSHNQLLDRSIDQLLDYSYKCKKCLKKQINLHLHLMLEEKLTNLESENQVLRQQAVSMAPNKFLSGRSKSIVQRSSEGGHVAGDARTSLDLHSPSLNQREFSEVEEKPQKSLNEKQQENQELLIRCIAQHLGFAGSRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGQAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSFTNGGLTGGVETLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRISRASLVKGPSRSVANTAAQQALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRAD* | 1631 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 7769571 | 7791596 | - | Vvi14g525 | Vvi14g525 | 775592 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi14g525 | 1630 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 68 | 813 | IPR027417 | - | |
| Vvi14g525 | 1630 | Coils | Coil | 1131 | 1151 | - | - | |
| Vvi14g525 | 1630 | Gene3D | - | 861 | 910 | - | - | |
| Vvi14g525 | 1630 | Gene3D | - | 814 | 860 | - | - | |
| Vvi14g525 | 1630 | Gene3D | - | 761 | 813 | - | - | |
| Vvi14g525 | 1630 | Gene3D | Kinesin motor domain | 93 | 690 | IPR036961 | - | |
| Vvi14g525 | 1630 | ProSiteProfiles | IQ motif profile. | 882 | 911 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | Gene3D | - | 467 | 651 | - | - | |
| Vvi14g525 | 1630 | ProSiteProfiles | IQ motif profile. | 786 | 815 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | ProSiteProfiles | IQ motif profile. | 763 | 790 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | MobiDBLite | consensus disorder prediction | 1019 | 1053 | - | - | |
| Vvi14g525 | 1630 | PRINTS | Myosin heavy chain signature | 120 | 139 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | PRINTS | Myosin heavy chain signature | 177 | 202 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | PRINTS | Myosin heavy chain signature | 224 | 251 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | PRINTS | Myosin heavy chain signature | 457 | 485 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | PRINTS | Myosin heavy chain signature | 510 | 538 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | ProSiteProfiles | Dilute domain profile. | 1260 | 1573 | IPR002710 | - | |
| Vvi14g525 | 1630 | PANTHER | MYOSIN-9 | 33 | 1627 | - | - | |
| Vvi14g525 | 1630 | SMART | MYSc_2a | 84 | 761 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 881 | 903 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 833 | 855 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 858 | 880 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 810 | 832 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 785 | 807 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SMART | iq_5 | 762 | 784 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | Pfam | IQ calmodulin-binding motif | 860 | 875 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | Pfam | IQ calmodulin-binding motif | 765 | 783 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | Pfam | IQ calmodulin-binding motif | 813 | 831 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | Pfam | IQ calmodulin-binding motif | 787 | 802 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 813 | 911 | IPR027417 | - | |
| Vvi14g525 | 1630 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 36 | 85 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | Pfam | DIL domain | 1449 | 1552 | IPR002710 | - | |
| Vvi14g525 | 1630 | SMART | DIL_2 | 1448 | 1555 | IPR002710 | - | |
| Vvi14g525 | 1630 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 340 | 629 | - | - | |
| Vvi14g525 | 1630 | Pfam | Myosin N-terminal SH3-like domain | 38 | 76 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | Coils | Coil | 908 | 939 | - | - | |
| Vvi14g525 | 1630 | CDD | MYSc_Myo11 | 104 | 748 | IPR036018 | - | |
| Vvi14g525 | 1630 | Gene3D | - | 695 | 758 | - | - | |
| Vvi14g525 | 1630 | Coils | Coil | 1003 | 1065 | - | - | |
| Vvi14g525 | 1630 | Pfam | Myosin head (motor domain) | 92 | 748 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | ProSiteProfiles | IQ motif profile. | 811 | 838 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | PANTHER | MYOSIN | 33 | 1627 | - | - | |
| Vvi14g525 | 1630 | CDD | MyosinXI_CBD | 1211 | 1596 | IPR037975 | GO:0007015 | |
| Vvi14g525 | 1630 | MobiDBLite | consensus disorder prediction | 1019 | 1071 | - | - | |
| Vvi14g525 | 1630 | Gene3D | - | 280 | 338 | - | - | |
| Vvi14g525 | 1630 | ProSiteProfiles | IQ motif profile. | 859 | 885 | IPR000048 | GO:0005515 | |
| Vvi14g525 | 1630 | ProSiteProfiles | Myosin motor domain profile. | 90 | 760 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi14g525 | 1630 | Coils | Coil | 944 | 971 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi14g525 | K10357 | - | vvi:100243373 | 2893.22 |