Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g715 ATGGTGGACGTGGCTCAGAAGCTGGAGCAGCTTGAGATGGTTATGGGTAACGCTCAGGAGGATGGGATTTCTCATCTCTCCTCTGGGACTGTTCATTATAACCCCTCCGATCTTTCCGGTTGGGTTCAGTCCATGCTTACTGAGCTCAATCCTCCCTCCTCTGCTTTCGCTTCCTCCTCACAGCAAACCCCCATCGACGATCCTCTCCTTGCTCCCTCCGATGCGATTCCGGGCGTTGCCTCGACTCGGCCGGTTGTAGTGGTGGACTCGCAGGAAACGGGTGTGCGACTGGTTCACACCTTGATGGCTTGTGCAGACGCGGTTCAACAGGACAATATGAAGTTGGCAGATGCACTGGTGAAGCACATAGGCCTGCTGGCGGCGTCCCAAGCTGGCGCTATGAGAAAGGTCGCCACCTACTTCGCAGAAGCTCTGGCTCGTCGAATCTACAGAATCTACCCTCAAGACTCTCTGGAATCGTCTTACTCGGATATTCTCCAGATGCACTTCTATGAGGCCTGCCCCTACCTCAAATTCGCCCACTTCACAGCCAATCAAGCCATCCTCGAGGCCTTCGCCGGCGCCAACAGAGTTCATGTCATCGATTTCGGCCTGAAACAGGGGATGCAATGGCCGGCTCTTATGCAGGCCCTAGCATTGCGCCCTGGTGGCCCACCGTCATTTCGACTCACTGGAATTGGCCCTCCGCAGCCGGACAATACCGACGCCTGCATCGCCTGCTGGCTCGACCGGGGGCCATCGAGAAGGTGTTGTCGTCTATCAAAGCCATGA 792 56.31 MVDVAQKLEQLEMVMGNAQEDGISHLSSGTVHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSDAIPGVASTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDACIACWLDRGPSRRCCRLSKP* 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14806791 14808361 + Vvi14g715 Vvi14g715 775782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g715 263 MobiDBLite consensus disorder prediction 52 73 - -
Vvi14g715 263 MobiDBLite consensus disorder prediction 52 67 - -
Vvi14g715 263 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 243 IPR005202 -
Vvi14g715 263 Pfam Transcriptional regulator DELLA protein N terminal 1 53 IPR021914 -
Vvi14g715 263 Gene3D - 1 49 IPR038088 -
Vvi14g715 263 PANTHER DELLA PROTEIN RGL1 1 243 IPR030006 GO:0003712|GO:0005634
Vvi14g715 263 Coils Coil 1 21 - -
Vvi14g715 263 ProSiteProfiles GRAS family profile. 88 263 IPR005202 -
Vvi14g715 263 Pfam GRAS domain family 97 242 IPR005202 -
Vvi14g715 263 SMART DELLA_2 1 59 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14020 PF03514 GRAS 7.10E-53 CL0063 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g715 K14494 - pvy:116115911 377.096