Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g715 | ATGGTGGACGTGGCTCAGAAGCTGGAGCAGCTTGAGATGGTTATGGGTAACGCTCAGGAGGATGGGATTTCTCATCTCTCCTCTGGGACTGTTCATTATAACCCCTCCGATCTTTCCGGTTGGGTTCAGTCCATGCTTACTGAGCTCAATCCTCCCTCCTCTGCTTTCGCTTCCTCCTCACAGCAAACCCCCATCGACGATCCTCTCCTTGCTCCCTCCGATGCGATTCCGGGCGTTGCCTCGACTCGGCCGGTTGTAGTGGTGGACTCGCAGGAAACGGGTGTGCGACTGGTTCACACCTTGATGGCTTGTGCAGACGCGGTTCAACAGGACAATATGAAGTTGGCAGATGCACTGGTGAAGCACATAGGCCTGCTGGCGGCGTCCCAAGCTGGCGCTATGAGAAAGGTCGCCACCTACTTCGCAGAAGCTCTGGCTCGTCGAATCTACAGAATCTACCCTCAAGACTCTCTGGAATCGTCTTACTCGGATATTCTCCAGATGCACTTCTATGAGGCCTGCCCCTACCTCAAATTCGCCCACTTCACAGCCAATCAAGCCATCCTCGAGGCCTTCGCCGGCGCCAACAGAGTTCATGTCATCGATTTCGGCCTGAAACAGGGGATGCAATGGCCGGCTCTTATGCAGGCCCTAGCATTGCGCCCTGGTGGCCCACCGTCATTTCGACTCACTGGAATTGGCCCTCCGCAGCCGGACAATACCGACGCCTGCATCGCCTGCTGGCTCGACCGGGGGCCATCGAGAAGGTGTTGTCGTCTATCAAAGCCATGA | 792 | 56.31 | MVDVAQKLEQLEMVMGNAQEDGISHLSSGTVHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSDAIPGVASTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDACIACWLDRGPSRRCCRLSKP* | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14806791 | 14808361 | + | Vvi14g715 | Vvi14g715 | 775782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g715 | 263 | MobiDBLite | consensus disorder prediction | 52 | 73 | - | - | |
Vvi14g715 | 263 | MobiDBLite | consensus disorder prediction | 52 | 67 | - | - | |
Vvi14g715 | 263 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 1 | 243 | IPR005202 | - | |
Vvi14g715 | 263 | Pfam | Transcriptional regulator DELLA protein N terminal | 1 | 53 | IPR021914 | - | |
Vvi14g715 | 263 | Gene3D | - | 1 | 49 | IPR038088 | - | |
Vvi14g715 | 263 | PANTHER | DELLA PROTEIN RGL1 | 1 | 243 | IPR030006 | GO:0003712|GO:0005634 | |
Vvi14g715 | 263 | Coils | Coil | 1 | 21 | - | - | |
Vvi14g715 | 263 | ProSiteProfiles | GRAS family profile. | 88 | 263 | IPR005202 | - | |
Vvi14g715 | 263 | Pfam | GRAS domain family | 97 | 242 | IPR005202 | - | |
Vvi14g715 | 263 | SMART | DELLA_2 | 1 | 59 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
14020 | PF03514 | GRAS | 7.10E-53 | CL0063 | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g715 | K14494 | - | pvy:116115911 | 377.096 |