Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g752 | ATGGAGCACCTCCATGGCCTGCTCAGAATTCATGTCCACAGAGGCGTCAATCTCGCAAAGAGAGACGTTCTTAGCAGCGACCCCTACGTCATTGTTCGAATGGGCAAACAGAAACTGAAGACTCGCGTGGTGAATAAGAATGTAAATCCCGAGTGGAATGAAGACTTAACCCTCTCTGTTGACGATACAAATCTTCCAGTCAAGATTTTTGTGTATGACAGAGACACATTCAGTCTGGATGACAAAATGGGGGACGCAGAGTTTCAAATCGGCCCCTTCGTAGAAGCGCTAAGGATGGAGTTGAATGGGCTTCCAAGTGGAACCATAATAACAAGAGTTCAACCCAACAGGGAAAATTGCCTCGCAGAAGAGAGCTGCATTATCTGGACCGAAGGGAAGGTGGTCCAAAATCTGGTTCTCAGGCTCAGAAATGTCGAGAGTGGTGAAGTGGAACTCCAATTACAGTGGATTGATATTCCGGGCTCCAGGGGCTTATAG | 498 | 47.39 | MEHLHGLLRIHVHRGVNLAKRDVLSSDPYVIVRMGKQKLKTRVVNKNVNPEWNEDLTLSVDDTNLPVKIFVYDRDTFSLDDKMGDAEFQIGPFVEALRMELNGLPSGTIITRVQPNRENCLAEESCIIWTEGKVVQNLVLRLRNVESGEVELQLQWIDIPGSRGL* | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 16580075 | 16581881 | + | Vvi14g752 | Vvi14g752 | 775819 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g752 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
Vvi14g752 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Vvi14g752 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
Vvi14g752 | 165 | Gene3D | C2 domain | 2 | 163 | IPR035892 | - | |
Vvi14g752 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - | |
Vvi14g752 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 114 | IPR035892 | - | |
Vvi14g752 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
Vvi14g752 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g752 | - | - | vvi:100260351 | 331.257 |