Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g768 ATGGCACTTGCCAAGGACCGGACCCCACATGACTTGAGCATGGGCTCCGTGCAACACTGTTCTTTGATTTACGGAAATGTGATAGGAGGATCAGCAGTTGAAGGGGTTTCAGATCTTTCCTCGCCCGGGGTTTATGGGCTCGATGATTATCACAAGGCCGTGATTGAGGAGGGAGATGAGTCGGAGAAGAGTAGTGCCGGGTTTGTCAAGCCGTATGTCATGAGCCATGCTTCTTCCATTTCTGGTGCCAGCAGTGCAAATTGTAACGCAATTCGGCCTATGAATTATCAACCCCAGGAAGCTCATTCTGTGATAACCTTCAAAACCAGGTATGAGAATTTCATGCACAACAGTGGATCTTTGCTTAGCTTTGAGCAAAATGAGAGGGGTTCTCAGGTCACTTACACCAAGGTTTGCCACGAAGATGACTACTCCAATTGGGAAGATAATTTGAATTACGATTACCAAAATCAACTCAACCCAAAGTTGAACTCCAACCCTCGGCTGTTGGAGGATTTCAACTGTTTTCCGGCCAGCAGCTATGGCTCCATGAGCGGTAACACCCCAAAAGAAAACCAACATGGAGAAGAGTCATTTGGGTGGATATACACTGAAGCAACCGCAGTCACTGATAGCATTCAGGAGTCTGCAACAAAAGAATCATGCTTCCATAAGCGCCCCCATATGGGAGAGACCATGCAAGCTCTAAAAAGGCAGTGCACAGCTGCAACAAGGAAGTCCAAACCAAAGTCAATTCCACCCAAGGATCCACAAAGCCTCGCAGCCAAGAATCGACGAGAGCGGATCAGCGAGCGGCTAAAGATACTGCAAGATCTGGTACCAAATGGTTCCAAGGTTGATTTGGTGACCATGTTAGAGAAAGCCATTAGTTATGTCAAGTTCCTCCAATTGCAAGTGAAGGTGCTGGCAACCGATGAATTTTGGCCAGTGCAGGGTGGAAAGGCTCCTGATATCTCTCAAGTGAAGGAAGCCATTGATGCCATTCTGTCATCCCAGAGAGACACAAATTCAAGCTCAAAGTGA 1044 47.22 MALAKDRTPHDLSMGSVQHCSLIYGNVIGGSAVEGVSDLSSPGVYGLDDYHKAVIEEGDESEKSSAGFVKPYVMSHASSISGASSANCNAIRPMNYQPQEAHSVITFKTRYENFMHNSGSLLSFEQNERGSQVTYTKVCHEDDYSNWEDNLNYDYQNQLNPKLNSNPRLLEDFNCFPASSYGSMSGNTPKENQHGEESFGWIYTEATAVTDSIQESATKESCFHKRPHMGETMQALKRQCTAATRKSKPKSIPPKDPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAILSSQRDTNSSSK* 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17518669 17520154 + Vvi14g768 Vvi14g768 775835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g768 347 CDD bHLH_AtIND_like 254 316 - -
Vvi14g768 347 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 338 - -
Vvi14g768 347 SMART finulus 259 308 IPR011598 GO:0046983
Vvi14g768 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 253 302 IPR011598 GO:0046983
Vvi14g768 347 Pfam Helix-loop-helix DNA-binding domain 262 303 IPR011598 GO:0046983
Vvi14g768 347 MobiDBLite consensus disorder prediction 241 265 - -
Vvi14g768 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 312 IPR036638 GO:0046983
Vvi14g768 347 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 338 - -
Vvi14g768 347 Gene3D - 253 310 IPR036638 GO:0046983
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14024 PF00010 HLH 1.80E-07 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g768 - - vvi:100255367 660.603