Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g835 ATGTTGGATGAGAAGAAGAAGGCTGCAGATCGGTACCTGAAGCGCCAAGTTCTCGGAGAGGGCACATACGGCGTCGTTTACAAGGCCTTCGACACCATGACTGGGCAGACTGTTGCCATTAAGAGAATTCGGCTTGGGAATTACAAGGAGGGTGTGAATTTCACTGCACTTAGGGAAATCAAACTCCTTAAAGAGCTCAAGGACCCGAATATAATTGAGTTGATTGATGCATTTCCTCATGATGGAAATTTGCACCTAGTGTTTGAATTCATGCAGACTGACTTGGAAGCTGTTATTCGAGATAGAAATATTGTTCTTTCTCTAGCTGATATAAAGTCATATATGCAGATGACATTGAAGGGGCTTGCATATTGTCATAAGAAATGGGTTGTTCATAGAGATATGAAGCCAAACAATTTACTGATAGGAGAAGATGGACAGCTTAAATTAGCAGATTTTGGTTTAGCACGCATATTTGGGAGCCCAAATCGCAAATTCACTTACCAGGTTTTTGCTCGATGGTACAGGGCACCTGAATTGTTGTTTGGTGCCAAACAATATGGATCAGGGGTTGATATCTGGGCTGTGGCTTGTATATTTGCTGAGCTTCTCCTTCGCAGACCCTTTCTGCAGGGATCTAGTGACATTGATCAATTAGGAAAGATCTTTGCAGCATTTGGGACTCCAAAACCTTCCCAGTGGCCTGACATGGTTTGCCTTCCTAATTATATGGAATACCAGTATGTTCCGGCACCCCCATTGCGAACATTGTTTCCAACTGCAACTGATGATGCTTTGGATCTTTTAGCAAAGATGTTCACTTATGATCCAAGAGCAAGAATTTCTGCAGAGCAGGCACTGGAGCACAGGTATTTTTCTTCTTTACCGCTGCCAACTAAACCAGCGGAGCTTCGTATACCTCCTCCAAAGGGGGATTCTTCCAATCCTGAACCCTTAGATCTTAATCAACAACAGAGTGGTCCAACTGTACTATCACCATCAAGAAAATTGAGGAGAGTGACACTAGATCATGAAAGGATTTGA 1044 43.01 MLDEKKKAADRYLKRQVLGEGTYGVVYKAFDTMTGQTVAIKRIRLGNYKEGVNFTALREIKLLKELKDPNIIELIDAFPHDGNLHLVFEFMQTDLEAVIRDRNIVLSLADIKSYMQMTLKGLAYCHKKWVVHRDMKPNNLLIGEDGQLKLADFGLARIFGSPNRKFTYQVFARWYRAPELLFGAKQYGSGVDIWAVACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPSQWPDMVCLPNYMEYQYVPAPPLRTLFPTATDDALDLLAKMFTYDPRARISAEQALEHRYFSSLPLPTKPAELRIPPPKGDSSNPEPLDLNQQQSGPTVLSPSRKLRRVTLDHERI* 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19628802 19652923 + Vvi14g835 Vvi14g835 775902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g835 347 Pfam Protein kinase domain 14 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g835 347 CDD STKc_CDK7 11 304 IPR037770 GO:0005675|GO:0008353|GO:0070985
Vvi14g835 347 MobiDBLite consensus disorder prediction 299 347 - -
Vvi14g835 347 Gene3D Transferase(Phosphotransferase) domain 1 93 307 - -
Vvi14g835 347 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Vvi14g835 347 SMART serkin_6 12 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g835 347 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Vvi14g835 347 SUPERFAMILY Protein kinase-like (PK-like) 9 298 IPR011009 -
Vvi14g835 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Vvi14g835 347 MobiDBLite consensus disorder prediction 316 332 - -
Vvi14g835 347 PANTHER CYCLIN-DEPENDENT KINASE D-2 8 329 - -
Vvi14g835 347 PANTHER CELL DIVISION PROTEIN KINASE 8 329 - -
Vvi14g835 347 ProSiteProfiles Protein kinase domain profile. 12 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g835 Vvi17g254 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76230 PF00069 Pkinase 1.10E-70 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g835 K02202 - vvi:100244503 704.901