Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g867 ATGGCTGATATCCATTGTCAAACAAAACCAAATAATGCTACCATGGGTTTGAAGCTGTTTGGCTTCAACATTTCAGAAGTTGAGGAGTTGGAATCGGGAAAATCTCCATCGTCTCCGGAATCGGAGATTTTTCAGGCCGATGGCCGGAGATATGAGTGTCAGTACTGTTGCCGTGAGTTCGCCAACTCTCAGGCTTTAGGTGGTCATCAGAACGCTCACAAGAAGGAAAGACAGCAGCTGAAGCGAGCCAAATTGCAAGCATCTGCTCGGAGCTTTCCTGATTCTTTCATCCGAAACCCGATGGTATCAGCGTTCATGCCGCCGCCGCATCTTTTTGCACCGCCTTCCGCGCCACCACAATCGTTTCCTTGGGCTTACATGCCACGCGCCGGCGCAGCGCCATCTTTCCGCGCGCCGCAGCGTGGCTTCATGATTAAATGCGGCAGCGAGGCAGCGCCGGAAGCATATGCCGGCTACGAGAGGGAAACTCCTGTGAGGGCCACGCTGTATCGTGAAGTTCAGGCCCACGCCGGCGTTGTGCCGGAGTTGCTGAGAAGAGGTGATGATGGGCCACGTTTGGAAAAGGGCTTGGGCTTAGATTTGCATCTTAGTCTCGGGCCGGCCAAGCCATGA 633 54.19 MADIHCQTKPNNATMGLKLFGFNISEVEELESGKSPSSPESEIFQADGRRYECQYCCREFANSQALGGHQNAHKKERQQLKRAKLQASARSFPDSFIRNPMVSAFMPPPHLFAPPSAPPQSFPWAYMPRAGAAPSFRAPQRGFMIKCGSEAAPEAYAGYERETPVRATLYREVQAHAGVVPELLRRGDDGPRLEKGLGLDLHLSLGPAKP* 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 20758278 20758911 + Vvi14g867 Vvi14g867 775934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g867 210 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Vvi14g867 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Vvi14g867 210 PANTHER ZINC FINGER PROTEIN GIS3 7 209 - -
Vvi14g867 210 PANTHER ZINC FINGER PROTEIN 5 7 209 IPR044299 GO:0010090
Vvi14g867 210 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Vvi14g867 210 Gene3D Classic Zinc Finger 40 97 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g331 Vvi14g867 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g867 - - vvi:100254923 407.527