Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g884 ATGCGGATGAGCTGTAATGGGTGTAGAGTCCTCCGCAAGGGCTGCAGCGACAACTGCACCATCCGACCCTGTCTTCAGTGGATCAAAACCCCTGAATCTCAGGCCAATGCCACCGTCTTCCTCGCCAAATTCTACGGTCGCGCTGGCCTCATGAATCTCATCAACTCCGGCCCCGAACACCTCCGTCCTGCCATATTCAGTTCTCTTCTCTACGAGGCTTGTGGGAGGATCGTGAATCCCATTTATGGGTCTGTTGGGTTGCTGTGGTCTGGAAGCTGGCACCTCTGCCAGGCTGCCGTGGAGGCGGTGCTCAAGGGTGAGCCCATCACACAGATCACCTCTGAAGCAGCGGCCACCGGCCAGGGTCCACCGCTCAAGGCCTACGACATTCGTCACGTTTCCAAGGACGAGAACTCCGCCGCAAACGATCTCCACCGAGCCAAAAATAGGTGTCGGTTCAAGCGGTCCGGGTCACGACTCGACGGTGAGTCACCCGTCGGAGCCGCATACCGTGGAGGGCGAGAGCCGAGAGACTGTGAGCATGGTGTCTGTGGAGACGGCTGA 564 58.87 MRMSCNGCRVLRKGCSDNCTIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINSGPEHLRPAIFSSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITQITSEAAATGQGPPLKAYDIRHVSKDENSAANDLHRAKNRCRFKRSGSRLDGESPVGAAYRGGREPRDCEHGVCGDG* 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21210989 21212344 + Vvi14g884 Vvi14g884 775951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g884 187 MobiDBLite consensus disorder prediction 173 187 - -
Vvi14g884 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 161 - -
Vvi14g884 187 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Vvi14g884 187 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Vvi14g884 187 MobiDBLite consensus disorder prediction 156 187 - -
Vvi14g884 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 161 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g309 Vvi14g884 ECH
Vvi14g884 Vvi17g327 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14030 PF03195 LOB 8.00E-25 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g884 - - vvi:100261743 330.872