Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g921 ATGCCTCCCGGAATTTCTGTAAAAAGTGGAGGAGCATCAATTGAAGTGCAAAATGAACAACCAGCAAGTTCAAGGTCACTGAAGGAGAAAACATCAAAAGCTGAAAGGCGTGCACTTCAGGAGGCTCAGAGAGCTGCAAAAGCTGCGGCAAAAGCTGAAGTAAGTAAGGCACCCATTGCTGCTTCTGGGGTTGCAACTTCAGTTAATGCAAAACCAGCTAAGGTTTCAAAGCTTTCTTCACAGAAGAAAGATAGTGCTTCAGTCACAGCTTCTGAGAAAAAGGGTGTTGACCGTCCACCAGAGAAGGATAGAAAGAAAGATGTACCTCATCCACGCATGCAATTTGATGATAAGAGTCGAGTGGAGAAGGCAAAAAGGCGTGCAGTAGTAAGGCCAATTGAAGTTAGGAACAGAGTTGAGTTATTTAGACATTTACCTCAGTATGAACGTGGAACTCTGCTTCCTGATCTTGAGTCAAAGTTTTTCCTACTTGATCCAATGCATCCTGCTGTTTACAAGGTTGGCTTACAGTATTTAGCAGGAGACGTATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAGGCATTCCAAGAGGCCATCAAAGACTATTCCACTCCACCTGAAAAAACTCTTGTCAGAGACTTAACTGCTAGATTAAGCAGTTATGTTTCATTTCTAATTGAGTGCAGACCCCTTTCAATAAGCATGGGAAATGCAATTAGGTTTTTAAAAAGTCGAATTGCCAAGTTACCTTTATCTTTGTCTGAGTCTGAAGCGAAAGCAAGTCTTCAGTCAGATATCAATCGGTTTATAAACGAGAAGATAGTACTTGCGGACAAAGTAATAGTCAGGCATGCTGTAACAAAAATCAGGGATGGGGATGTCCTACTTACATATGGGTCTTCCTCTGCTGTTGAGATGATACTATTGTATGCCCATGAGCTCGGCAAACAGTTTCGTGTTGTTGTAGTGGACTCTCGTCCAAAGCTTGAAGGGCAACTCTTACTTCGAAGATTGGTGGGAAAAGGCCTTAGCTGCACATACACCCATATAAATGCTGTTTCATATATCATGCATGAAGTTACTCGAGTTTTCCTTGGGGCTTCATCTGTGTTGTCCAATGGAACAGTTTACTCGAGGGTTGGGACTGCATGTGTTTCTATGGTTGCTCATGCATTCCGAGTTCCAGTGTTAGTATGTTGTGAAGCATATAAATTTTATGAGAGAGTACAGCTTGATTCGATTTGCTCTAATGAACTTGGTGATCCTGATGCAATTTCAAAAGTTCCTGGTAGGGAGGAAATTAACTATTTGGATGATTGGGCGAAGAGTGAAAATTTGCAGCTTTTGAATCTGATATATGATGCAACACCTTCAGATTATGTTTCGATGATTATAACAGATTATGGCATGGTCCCACCTACAAGTGTGCCTGTGATTGTGCGAGAGTACCGGAGAGAGCACTTGTGGATATAG 1479 41.99 MPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKAPIAASGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYRREHLWI* 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22173019 22185158 + Vvi14g921 Vvi14g921 775988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g921 492 SUPERFAMILY NagB/RpiA/CoA transferase-like 166 485 IPR037171 -
Vvi14g921 492 MobiDBLite consensus disorder prediction 26 42 - -
Vvi14g921 492 MobiDBLite consensus disorder prediction 87 121 - -
Vvi14g921 492 MobiDBLite consensus disorder prediction 1 121 - -
Vvi14g921 492 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 8 492 - -
Vvi14g921 492 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 8 492 - -
Vvi14g921 492 MobiDBLite consensus disorder prediction 11 25 - -
Vvi14g921 492 Gene3D - 279 485 IPR042529 -
Vvi14g921 492 MobiDBLite consensus disorder prediction 72 86 - -
Vvi14g921 492 Pfam Initiation factor 2 subunit family 183 475 IPR000649 GO:0044237
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g921 Vvi17g370 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g921 K03680 - vvi:100246278 902.508