Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g921 | ATGCCTCCCGGAATTTCTGTAAAAAGTGGAGGAGCATCAATTGAAGTGCAAAATGAACAACCAGCAAGTTCAAGGTCACTGAAGGAGAAAACATCAAAAGCTGAAAGGCGTGCACTTCAGGAGGCTCAGAGAGCTGCAAAAGCTGCGGCAAAAGCTGAAGTAAGTAAGGCACCCATTGCTGCTTCTGGGGTTGCAACTTCAGTTAATGCAAAACCAGCTAAGGTTTCAAAGCTTTCTTCACAGAAGAAAGATAGTGCTTCAGTCACAGCTTCTGAGAAAAAGGGTGTTGACCGTCCACCAGAGAAGGATAGAAAGAAAGATGTACCTCATCCACGCATGCAATTTGATGATAAGAGTCGAGTGGAGAAGGCAAAAAGGCGTGCAGTAGTAAGGCCAATTGAAGTTAGGAACAGAGTTGAGTTATTTAGACATTTACCTCAGTATGAACGTGGAACTCTGCTTCCTGATCTTGAGTCAAAGTTTTTCCTACTTGATCCAATGCATCCTGCTGTTTACAAGGTTGGCTTACAGTATTTAGCAGGAGACGTATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAGGCATTCCAAGAGGCCATCAAAGACTATTCCACTCCACCTGAAAAAACTCTTGTCAGAGACTTAACTGCTAGATTAAGCAGTTATGTTTCATTTCTAATTGAGTGCAGACCCCTTTCAATAAGCATGGGAAATGCAATTAGGTTTTTAAAAAGTCGAATTGCCAAGTTACCTTTATCTTTGTCTGAGTCTGAAGCGAAAGCAAGTCTTCAGTCAGATATCAATCGGTTTATAAACGAGAAGATAGTACTTGCGGACAAAGTAATAGTCAGGCATGCTGTAACAAAAATCAGGGATGGGGATGTCCTACTTACATATGGGTCTTCCTCTGCTGTTGAGATGATACTATTGTATGCCCATGAGCTCGGCAAACAGTTTCGTGTTGTTGTAGTGGACTCTCGTCCAAAGCTTGAAGGGCAACTCTTACTTCGAAGATTGGTGGGAAAAGGCCTTAGCTGCACATACACCCATATAAATGCTGTTTCATATATCATGCATGAAGTTACTCGAGTTTTCCTTGGGGCTTCATCTGTGTTGTCCAATGGAACAGTTTACTCGAGGGTTGGGACTGCATGTGTTTCTATGGTTGCTCATGCATTCCGAGTTCCAGTGTTAGTATGTTGTGAAGCATATAAATTTTATGAGAGAGTACAGCTTGATTCGATTTGCTCTAATGAACTTGGTGATCCTGATGCAATTTCAAAAGTTCCTGGTAGGGAGGAAATTAACTATTTGGATGATTGGGCGAAGAGTGAAAATTTGCAGCTTTTGAATCTGATATATGATGCAACACCTTCAGATTATGTTTCGATGATTATAACAGATTATGGCATGGTCCCACCTACAAGTGTGCCTGTGATTGTGCGAGAGTACCGGAGAGAGCACTTGTGGATATAG | 1479 | 41.99 | MPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKAPIAASGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYRREHLWI* | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 22173019 | 22185158 | + | Vvi14g921 | Vvi14g921 | 775988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g921 | 492 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 166 | 485 | IPR037171 | - | |
Vvi14g921 | 492 | MobiDBLite | consensus disorder prediction | 26 | 42 | - | - | |
Vvi14g921 | 492 | MobiDBLite | consensus disorder prediction | 87 | 121 | - | - | |
Vvi14g921 | 492 | MobiDBLite | consensus disorder prediction | 1 | 121 | - | - | |
Vvi14g921 | 492 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 8 | 492 | - | - | |
Vvi14g921 | 492 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 8 | 492 | - | - | |
Vvi14g921 | 492 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
Vvi14g921 | 492 | Gene3D | - | 279 | 485 | IPR042529 | - | |
Vvi14g921 | 492 | MobiDBLite | consensus disorder prediction | 72 | 86 | - | - | |
Vvi14g921 | 492 | Pfam | Initiation factor 2 subunit family | 183 | 475 | IPR000649 | GO:0044237 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g921 | K03680 | - | vvi:100246278 | 902.508 |