Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g931 ATGGTGACCATTGGCATTGTTGTTGGGCTTCTTGTGCTTAGTCTTCTTGTGATGGCTGCATGGTTTGTACAAAAACGAAAGAAAAAGAGAGCTGGACTAAATATTGGCTATACCATGCCTTCTCCATTTGCATCCTCCCAAAATTCAGATTCAGTATTTCTAAGGCCCCATTCTTCATCAGCTCTACCTTTGGGAAGTGGATCTGGTAGTGATTTCGTGTATTCACCACCAGATCCAGTTGGCAGCAATTCAAGACCATGGTTCTCATATGAAGAACTTGTAGAGGCCACAGATGGGTTTTCATCACAGAATCTTTTGGGTGAAGGTGGATTTGGTTGTGTGTACAAAGGTTTCCTAGCAGATGGAAGAGAAGTAGCTGTAAAACAGCTAAAGATTGGTGGTGGACAGGGGGAACGCGAATTCAAAGCAGAAGTTGAGATTATTAGTCGTGTACACCATCGGCATTTGGTTTCACTTGTGGGTTACTGTATATCTGAGCATCAAAGATTACTTGTCTATGATTTCGTACCAAACGATACCCTTCATTACCATCTCCATGGTGAAGGTAGACCGGTGATGGATTGGGCAACTCGAGTAAAGGTTGCTGCTGGTGCAGCACGGGGAATAGCTTATCTACACGAGGACTGCCATCCACGGATTATTCACAGAGATATCAAGTCATCAAATATTCTTTTGGATATGAACTTTGAAGCTCAGGTTTCAGATTTTGGGCTTGCAAAGTTAGCATTGGATGCCAATACACATGTAACCACTCGTGTGATGGGAACCTTTGGATATATGGCTCCAGAGTATGCATCAAGTGGCAAGTTGACGGAAAAATCCGATGTTTATTCATTTGGGGTTGTGCTTTTAGAACTGATTACAGGTCGTAAACCTGTAGACGCATCTCAACCATTGGGAGATGAAAGCCTGGTTGAATGGGCTCGACCATTGCTTGCTCAAGCCCTTGATTCTGGAAACTTTGAAGGGTTGATAGATCCAAGACTGGAAAAGAACTTTGTTGAAAATGAGATGTTCCGGATGATTGAGGCAGCTGCAGCATGTGTGCGTCACTCAGCTTCTAAGAGGCCAAGGATGAGTCTGGTGGTGCGAGCCTTGGACTCCATGGATGAATTGTCAGACCTTACCAATGGAATGAAACCGGGACAAAGCGAAGTCTTTGATTCGGCACAACATTCTGCACAAATTAGAATGTTCCAAAGGATGGCGTTTGGTAGTCAAGAATACAGTTCAGAATTTTTCAATCAAAGTCAAAGTAGCTCGAGGAGTTTTTCCAGAATGCCTTATTAG 1311 43.4 MVTIGIVVGLLVLSLLVMAAWFVQKRKKKRAGLNIGYTMPSPFASSQNSDSVFLRPHSSSALPLGSGSGSDFVYSPPDPVGSNSRPWFSYEELVEATDGFSSQNLLGEGGFGCVYKGFLADGREVAVKQLKIGGGQGEREFKAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDFVPNDTLHYHLHGEGRPVMDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDMNFEAQVSDFGLAKLALDANTHVTTRVMGTFGYMAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLAQALDSGNFEGLIDPRLEKNFVENEMFRMIEAAAACVRHSASKRPRMSLVVRALDSMDELSDLTNGMKPGQSEVFDSAQHSAQIRMFQRMAFGSQEYSSEFFNQSQSSSRSFSRMPY* 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22377583 22390052 - Vvi14g931 Vvi14g931 775998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g931 436 ProSitePatterns Protein kinases ATP-binding region signature. 106 128 IPR017441 GO:0005524
Vvi14g931 436 ProSiteProfiles Protein kinase domain profile. 100 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g931 436 Gene3D Phosphorylase Kinase; domain 1 79 175 - -
Vvi14g931 436 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 2 424 - -
Vvi14g931 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Vvi14g931 436 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 424 - -
Vvi14g931 436 SMART serkin_6 100 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g931 436 Pfam Protein tyrosine and serine/threonine kinase 103 371 IPR001245 GO:0004672|GO:0006468
Vvi14g931 436 Gene3D Transferase(Phosphotransferase) domain 1 176 395 - -
Vvi14g931 436 CDD STKc_IRAK 106 376 - -
Vvi14g931 436 SUPERFAMILY Protein kinase-like (PK-like) 77 373 IPR011009 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76233 PF07714 PK_Tyr_Ser-Thr 7.40E-45 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g931 - - vvi:100246425 808.135