Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g979 ATGGTTAATTCAGCTGATTTGGTTACTATTGGCATCTCTGCTGGCCTGGCTATTGGAATTTTGATAGCTTCTCTTGTATTTTGCGGCATAAGGTGGTACAAAAAACATTCTCATCTTCGACGTTGTGCAAATGAGCGTTGCTCAACAGCTCTTCCTATACGCACTAATGGCCTAGATGCAAGCATTGACTCTAGTGCGTCTGTCTCCAACTCTATAGCTATCCCAGGGTCAGAGTTCCCTGCCAAAGATTCTCATCTCTTTTGGTGGAGTCATCGTCATGATAAAGATCAGCTTGCTTCAGCATCTGGCATACCAAGATACTCCTACAAGGATATTCAAAAAGCAACACACAATTTCACAACTATTTTGGGACAGGGGTCATTTGGACCAGTGTATAAAGCTACAATGGCTACAGGTGGAGTTGTAGCCGTAAAGGTGCTTGCTTCTAATTCAAAACAGGGGGAGAAAGAGTTTCAAACTGAGGTATCTTTGCTAGGTAGACTGCACCACCGGAATCTTGTGAATTTGGTAGGATATTGTGTAGATAAAGGCCAACACATGTTAATTTATGAATTCATGAGTAATGGAAGCTTGGAAAACCTTCTATACAGTGAAGAGGGACAGGGTTTGAGTTGGGAGGAAAGGCTGCAAATTGCGCTTGATATTTCACATGGAATCGAATATCTTCACGAAGGGGCAGTTCCACCCGTTATACATCGGGATTTGAAGTCTGCTAATATATTGTTGGACCAATCCATGAGAGCTAAGGTTGCTGATTTTGGACTGTCAAAGGAAGAAGTCTTTGATGGCCGTAACTCAGGCCTGAAAGGTACATATGGCTACATAGACCCTGCCTATATATCCTCTAACAAGTTCACCATGAAAAGTGACATCTACAGTTTTGGTGTTATCATCTTTGAGCTCATTACTGCAATCCACCCACACCAAAACCTAATGGAGTTTGTCAATCTTGCGGCTATGAGCCCAGATGGGGCTGATGAAATACTTGATAAGCAACTTGTGGGAGAATGTAAACTCGAAGAAGTAAGAACACTGGCCAGCATCGGACACAAATGCTTGCACAAAACACCAAGGAAGCGCCCATCAATTGGAGAGGTTTCACTGGCTATAGCAAGGATAAAACAAAGGCGTTTTGCTAAAGAACATACCATGTCTTTGGCAGACAGTGATCTTTCACGAATGGTAAGCCGGATAGAGAATCAACAAGTTGAGTTGTTTGAGATAGCCAGCTTCAAGGACAAAGCCACTGAATAG 1275 42.75 MVNSADLVTIGISAGLAIGILIASLVFCGIRWYKKHSHLRRCANERCSTALPIRTNGLDASIDSSASVSNSIAIPGSEFPAKDSHLFWWSHRHDKDQLASASGIPRYSYKDIQKATHNFTTILGQGSFGPVYKATMATGGVVAVKVLASNSKQGEKEFQTEVSLLGRLHHRNLVNLVGYCVDKGQHMLIYEFMSNGSLENLLYSEEGQGLSWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDQSMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISSNKFTMKSDIYSFGVIIFELITAIHPHQNLMEFVNLAAMSPDGADEILDKQLVGECKLEEVRTLASIGHKCLHKTPRKRPSIGEVSLAIARIKQRRFAKEHTMSLADSDLSRMVSRIENQQVELFEIASFKDKATE* 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23073871 23082769 + Vvi14g979 Vvi14g979 776046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g979 424 CDD STKc_IRAK 123 373 - -
Vvi14g979 424 Gene3D Phosphorylase Kinase; domain 1 86 192 - -
Vvi14g979 424 PANTHER OS01G0750732 PROTEIN 9 421 - -
Vvi14g979 424 SMART serkin_6 117 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g979 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 421 - -
Vvi14g979 424 ProSiteProfiles Protein kinase domain profile. 117 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g979 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Vvi14g979 424 Gene3D Transferase(Phosphotransferase) domain 1 193 405 - -
Vvi14g979 424 SUPERFAMILY Protein kinase-like (PK-like) 86 373 IPR011009 -
Vvi14g979 424 Pfam Protein tyrosine and serine/threonine kinase 119 373 IPR001245 GO:0004672|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76235 PF07714 PK_Tyr_Ser-Thr 9.60E-51 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g979 - - vvi:100246373 818.535