Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g2 | ATGGCTGCTCAGGCCTTGGTTTCATCTTCTCTTACTTCCTCAGTGGAGACTGCCAGACAGATACTTGGGTCAAGGCCTCTGCAATCTCCATCAAGGAAGTCTTCTTCCTTTGTGGTCAGGGCAGCTTCTACTCCACCAGTCAAGCAAGGAGCTGACAGGCCCCTCTGGTTTGCATCCAAGCAGAGCCTTACTTACTTGGATGGCAGTCTTCCAGGTGACTATGGGTTCGATCCACTGGGACTTTCAGACCCTGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTAGCCTACGGGGAGGTCATCAACGGGCGATTCCAAGACTGGGCCAACCCAGGGTCAATGGGGAAGCAGTACTTCCTCGGGCTTGAAAAATACTTGGGAGGGTCTGGCGACCCAGCCTACCCAGGAGGCCCACTGTTCAACCCTCTCGGGTTTGGTAAAGATGAGAAATCCCTCAAGGATCTGAAGCTCAAAGAGGTTAAGAATGGGAGATTGGCTATGTTGGCCATATTGGGCTACTTTGCACAAGGGCCTGTGACAGGAGTCGGGCCCCTCCAAAACCTGCTGGACCATTTGGCAGACCCTGTCAACAACAATATCATAACCAGCCTCAAGTTCCACAACTAG | 630 | 52.7 | MAAQALVSSSLTSSVETARQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHLADPVNNNIITSLKFHN* | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 124039 | 125348 | + | Vvi15g2 | Vvi15g2 | 776694 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g2 | 209 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 105 | 207 | - | - | |
Vvi15g2 | 209 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 106 | - | - | |
Vvi15g2 | 209 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 204 | - | - | |
Vvi15g2 | 209 | Pfam | Chlorophyll A-B binding protein | 64 | 106 | IPR022796 | - | |
Vvi15g2 | 209 | Pfam | Chlorophyll A-B binding protein | 112 | 177 | IPR022796 | - | |
Vvi15g2 | 209 | Gene3D | Chlorophyll a/b binding protein domain | 109 | 204 | - | - | |
Vvi15g2 | 209 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 106 | IPR001344 | GO:0009765|GO:0016020 | |
Vvi15g2 | 209 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 105 | 207 | IPR001344 | GO:0009765|GO:0016020 | |
Vvi15g2 | 209 | Gene3D | Chlorophyll a/b binding protein domain | 55 | 108 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g2 | K08909 | - | aof:109840150 | 308.916 |