Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g224 ATGGAACAAAAACAGTCGGGTTGCACAGGAGGAGCAGAAGCAGTTTTAAATCTTCAGCCAAACTCTTCAATCTCTATCACGTATCATCCTCATTTTGGTCCTCATGATGATCTGATCCTCCTTGAAATTGATGACAAGCTTCTTCCAGATGTCCTCCACCAGAGGGTAACTTTAAGAGGACAACCCAATGAAGATGCTGTTCTTTGTACTCAATCAAAGACTTATTCTATCAAATTTGTTGGAAACTCCAATTCTGTGTTCCTTATACCCCCAGTAGATCAGTCAGCATTGCATGAACATCCACAATATTCTGATGAGAAAGATGATGACCAGCGGGTTGTTGCATCTGTCATTAAAGTGGCTCCTGGTAACATGGAGCTTGTTGAGGTTGCTCCCAGGCTGGACAAGCTTAAATTGCTTCTCTTGGAGAATCCTTTTACATCTGAGGAGGTCTGGATTACGGGCTCTTTCAGCAGTAGAGATTGA 486 42.59 MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNMELVEVAPRLDKLKLLLLENPFTSEEVWITGSFSSRD* 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9349200 9353094 + Vvi15g224 Vvi15g224 776916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g224 161 Pfam Sister chromatid cohesion protein Dcc1 40 150 IPR019128 GO:0007064|GO:0031390
Vvi15g224 161 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 4 150 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g224 K11271 - vvi:100243575 283.493