Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g225 ATGGGTACTATTCTGAATATGCTTCTGCACAACTCAGTGTTGAATGATTGGTCATTAGATGCACTTGGTGAAGATGAAGTTGTGGGTGTTCTGGAATCAGATGGTTTTCCTCGCACACTAGGGTTACATTGTTTGCAAGTTTATGGTAGCAAGGTGGATGAGGGTGTTGGCAGTTGTGTATGGAAGTTGGATGAGAGGCGCTTATGCATTCATTTTGCTAGAGAAATCTTGAAGGATGGGAAGAGGAAGATGGAAAGTTTCATGGAGGAGTGGATTCAAAAGATTCCAGATGGGATGCAGGCAAGTTTTGACATGTTGGAAGGTGAAGTTTTGACAGAAAAGTTTGGGGTTGAGACATGGGTTCGTGCCTTTAGTGTTTCTTCCCTGCCCTCTAACCCAGCTGCACGTTTCTCCATGCTTTTTCAAGAGCGGCCAAAATGGGAGTGGAAGGATCTACAGCCCTATATAAGGGATTTGACTGTACCGGGTCTTTCTTCAGAAGGCTTGCTTCTGAAATACACACGAAAAACACAACCAAACTCAGATGCAGAGCCTGTATTTAGTGCCAGATAG 573 44.15 MGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLHCLQVYGSKVDEGVGSCVWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQASFDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRKTQPNSDAEPVFSAR* 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9353125 9353986 + Vvi15g225 Vvi15g225 776917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g225 190 Pfam Sister chromatid cohesion protein Dcc1 2 156 IPR019128 GO:0007064|GO:0031390
Vvi15g225 190 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 1 190 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g225 K11271 - vvi:100243575 391.349