Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g233 | ATGGCTCCCAGGAAGAAACCCAGCTCCAAATCAAACCAAAACCAACCTAACTCTCAGCCTTCCAAGTTCGGCATCCAACACTTCTTCCTTCGCCACTCCCAATCTTCCACCTCTCGCCCTAACGACGCTGTTTGCACCCCCGGCCCTAATCCACCATCACAGTCTGCTCCACCCCTTCAAAATCCTACAGCTGCTTGTCCTGAAAATAGTACGCCTCCTGGGAATATTCCAGCAATGGCTGTGGATGTTGAGGAGAACCCTTCTCAGGTGTCACCTGAGGTTTCCAAGTCCATGGCACTTAAGCGGTTCAAGTTCTCGCCTGGAATGTTGATAAAGCAAAGCCAGGATGATGGAAGTGACGAGGTGACATGGAAGATCTCTCCTGTGAATGAGCGGCTTCAAGCAATGACGAAGAAGCATGGCCCAGAGTGGCTTTGTTCCCCAACAATGAAAGCTTCTGAAAAATCTGTGGTATTCTCGAATAGGGTTAGCTTAAAAAAGGTGAAACTGGGTCAAGTCATGGATTCCAATGGAAATGAAATTGATATGACTGACCCAGGTGTGGTAAGAAAAAGACAAAGTCCTTTTCGAACTCCACCATCTTTATCATATTGCCACGAGAAGAATATTGATGGTGTTGATTGCAAATTGGTATCTGACCAGATGGGCTTAAGGCAACACAAAAAGGCATTGCTTGAACTTTTGGATCAAGTAGAAGATGCCATTTCTGTTGAAGAATCAGTATCTAGTGATGGAGAGGCATGTTTATCCAAAGTCCAGTGCATAAATGGTGATGAGATGCCTCTTAGAGTTGATCCTGCATTAAAGATACCAGAGATGGGTCCAACAGAAAAGGTCAATGGGGAATGTTCCAACATTATTTTTCTTGTTTTGGAGGTTTCTGAGAAGCGGGAATATGCTGATTTATCTGGTGCACAGTGTCCTTCTAAGGTACTTCGCTTACTGAATGAGAAAACTGGAGAAGAGCAGGCTGTGTATTTGAGGGATGAGTGGTTTTATTCTGTCATTGCTCCTGGAGATACTATACATGTAATCGGTAAATTTGATGACCAGGGAAAGTGTGATGTAGACCATGACAACAACTTTCTAATTGTTCACCCTGATATACTGGTGTCTGGCACTCGGGTAGCTGCTAGTTTCAGTTGCTCAAGACGAACTGTCCTGGATGAGAGGCTAAAATGCAGTGAACATTCAACTGCAGCATTGATAGGTACCTTGCTGCACCAAATTTTTCAGGCCGGACTTATTAGAGAGATTCCTACAAAAGTTTTCTTGGAGGAGTATGCAAGAATAGTGGTTCAGAAAAATCTTGAGAGCTTGTATGCATGTGGAGTAAATGAAGATGATATGTATAAAACTTTGATTGAGGCAACTCCAAGAATACTAAACTGGATCGTCCTCTTCAAGAATTCACAGGAGTATAGAGGTGCTACTGTTGATTTTGGATCTGATGATGGCTTGAAAAGGGTGAATGTATCTGAGGTAATAGATATTGAGGAAATGGCATGGGCCCCAAAATATGGCTTGAAAGGGATGATTGACGCTTCTCTTCGAATAAAATTTGAATCAAACACCAAGGAAGTGAATGAGATAATCATGCCTTTAGAGTTTAAAACTGGGAAAGGAACTAAAGGCCAGGCAACCATGGAACACACTGCACAGGTGATCTTGTACACTCTCCTTATGTCTGAGAGGTATCTGAAACCTATTGATTCTGGACTTCTCTATTATCTCAATACAGACCATACACAGGGCATTGCAGTTAAAAGATCAGACTTGGTTGGTCTAATTATGCGTCGCAATGAACTTGCAAAAGATATTCTAAAGGCATCAATGATGCAGCAACTGCCTCCAATGTTGCAGAGTCCAAGCATGTGCAAAAGTTGTCGCCATCTTAATGCTTGTACAATCTATCATAAGATGGGAAAATATTGCTTACTTCAAACTTTTGTTTTAACAAAAAATTCCAAGTTACCCTTGTATAGTCATCAATGA | 2016 | 42.16 | MAPRKKPSSKSNQNQPNSQPSKFGIQHFFLRHSQSSTSRPNDAVCTPGPNPPSQSAPPLQNPTAACPENSTPPGNIPAMAVDVEENPSQVSPEVSKSMALKRFKFSPGMLIKQSQDDGSDEVTWKISPVNERLQAMTKKHGPEWLCSPTMKASEKSVVFSNRVSLKKVKLGQVMDSNGNEIDMTDPGVVRKRQSPFRTPPSLSYCHEKNIDGVDCKLVSDQMGLRQHKKALLELLDQVEDAISVEESVSSDGEACLSKVQCINGDEMPLRVDPALKIPEMGPTEKVNGECSNIIFLVLEVSEKREYADLSGAQCPSKVLRLLNEKTGEEQAVYLRDEWFYSVIAPGDTIHVIGKFDDQGKCDVDHDNNFLIVHPDILVSGTRVAASFSCSRRTVLDERLKCSEHSTAALIGTLLHQIFQAGLIREIPTKVFLEEYARIVVQKNLESLYACGVNEDDMYKTLIEATPRILNWIVLFKNSQEYRGATVDFGSDDGLKRVNVSEVIDIEEMAWAPKYGLKGMIDASLRIKFESNTKEVNEIIMPLEFKTGKGTKGQATMEHTAQVILYTLLMSERYLKPIDSGLLYYLNTDHTQGIAVKRSDLVGLIMRRNELAKDILKASMMQQLPPMLQSPSMCKSCRHLNACTIYHKMGKYCLLQTFVLTKNSKLPLYSHQ* | 672 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9607466 | 9631231 | - | Vvi15g233 | Vvi15g233 | 776925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g233 | 671 | Pfam | DNA replication factor Dna2 | 324 | 525 | IPR014808 | - | |
Vvi15g233 | 671 | PANTHER | DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE | 166 | 607 | - | - | |
Vvi15g233 | 671 | PANTHER | DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE | 6 | 48 | - | - | |
Vvi15g233 | 671 | PANTHER | DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE | 63 | 139 | - | - | |
Vvi15g233 | 671 | PANTHER | DNA2/NAM7 HELICASE FAMILY | 166 | 607 | IPR045055 | - | |
Vvi15g233 | 671 | PANTHER | DNA2/NAM7 HELICASE FAMILY | 6 | 48 | IPR045055 | - | |
Vvi15g233 | 671 | PANTHER | DNA2/NAM7 HELICASE FAMILY | 63 | 139 | IPR045055 | - | |
Vvi15g233 | 671 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Vvi15g233 | 671 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Vvi15g233 | 671 | Pfam | Domain of unknown function DUF83 | 536 | 643 | IPR022765 | - | |
Vvi15g233 | 671 | Gene3D | - | 379 | 643 | IPR011604 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g233 | K10742 | - | vvi:100247844 | 1142.1 |